| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103511
Identifier: 197103511
GI number: 197103511
Start: 37199
End: 37870
Strand: Reverse
Name: 197103511
Synonym: PHZ_c0045
Alternate gene names: NA
Gene position: 37870-37199 (Counterclockwise)
Preceding gene: 197103512
Following gene: 197103503
Centisome position: 0.95
GC content: 67.71
Gene sequence:
>672_bases ATGATCGGGCCCGCAACCACAATTGCGGCTACGGGTTCAGAGCTTTACATGTCCCTTCGAGGGACCTCTCCGAGTTCGAG AAGGCAAATGTCAAAGAGATCAGCCGCTATCGCCATCGGCCTGGCCTTGGCCGCGGGGCTTGCGGCCTGCGCGACGCCTA CGCCTTACCAGCCGAACATTCCCGGACAGTCGACGTCCGGCGGGTATTCGGAAATCCAGCTGGAGTCCAACCGCTTCCGG GTGAACTTCCAGGGCAACACGCTCACCTCGCGCGAGACGGTCGAGGGCTACCTCCTCTTCCGCGCCGCCGAGCTGACCGT GCAGCAGGGCTACGACTGGTTCCAGGTCGTGGACCGCGCCACCGACCGGCAGTCGCGCACCTATGTGGAGCCCGACCCGT TCTACCGGCCCTGGTACGGCCCCACCTACGGCTACTGGCGCCCCTCCTGGCGCTACTACGGCCGCGGGTACGGCTGGCGC ACCTGGGATCCCTTCTGGGGCGACCCCTTCTGGGCCAACCGCGTCGACGTGCGCACCGTGGACCGCTACGAGGCCACCGC CGAGATCGTGATGGGCCGCGGCCAGAAGCCGGCCGACGATCCGCGCGCCTTCGACGCCCGGGCGGTCATCGACAACCTGC GTCCGCGCATCCAGTACCCCGAGCCCCGCTAG
Upstream 100 bases:
>100_bases CAGGCGCTGGCCGCCGGCGTCCTGCTGTTCGGCGCGCTCGGCCGCGCGATCTGGGTCCTGGTGGTCGTCCAGGGATGATG GGAAGGCGAGGCGCCGCCAG
Downstream 100 bases:
>100_bases ACGTCAGCGAAGGGCCGAGCGCGAACTCGGCGCCAGCCGCAGCACCTGCGGCTGGCGCTCCTTCGCGTCCCGATGCTGCG AGCAGCTAGACCTTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIGPATTIAATGSELYMSLRGTSPSSRRQMSKRSAAIAIGLALAAGLAACATPTPYQPNIPGQSTSGGYSEIQLESNRFR VNFQGNTLTSRETVEGYLLFRAAELTVQQGYDWFQVVDRATDRQSRTYVEPDPFYRPWYGPTYGYWRPSWRYYGRGYGWR TWDPFWGDPFWANRVDVRTVDRYEATAEIVMGRGQKPADDPRAFDARAVIDNLRPRIQYPEPR
Sequences:
>Translated_223_residues MIGPATTIAATGSELYMSLRGTSPSSRRQMSKRSAAIAIGLALAAGLAACATPTPYQPNIPGQSTSGGYSEIQLESNRFR VNFQGNTLTSRETVEGYLLFRAAELTVQQGYDWFQVVDRATDRQSRTYVEPDPFYRPWYGPTYGYWRPSWRYYGRGYGWR TWDPFWGDPFWANRVDVRTVDRYEATAEIVMGRGQKPADDPRAFDARAVIDNLRPRIQYPEPR >Mature_223_residues MIGPATTIAATGSELYMSLRGTSPSSRRQMSKRSAAIAIGLALAAGLAACATPTPYQPNIPGQSTSGGYSEIQLESNRFR VNFQGNTLTSRETVEGYLLFRAAELTVQQGYDWFQVVDRATDRQSRTYVEPDPFYRPWYGPTYGYWRPSWRYYGRGYGWR TWDPFWGDPFWANRVDVRTVDRYEATAEIVMGRGQKPADDPRAFDARAVIDNLRPRIQYPEPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25376; Mature: 25376
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPATTIAATGSELYMSLRGTSPSSRRQMSKRSAAIAIGLALAAGLAACATPTPYQPNI CCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGQSTSGGYSEIQLESNRFRVNFQGNTLTSRETVEGYLLFRAAELTVQQGYDWFQVVDRA CCCCCCCCCEEEEEECCEEEEEECCCEECCCHHHCEEEEEEEEEHHHHHCCHHHHHHHHH TDRQSRTYVEPDPFYRPWYGPTYGYWRPSWRYYGRGYGWRTWDPFWGDPFWANRVDVRTV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEC DRYEATAEIVMGRGQKPADDPRAFDARAVIDNLRPRIQYPEPR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGPATTIAATGSELYMSLRGTSPSSRRQMSKRSAAIAIGLALAAGLAACATPTPYQPNI CCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGQSTSGGYSEIQLESNRFRVNFQGNTLTSRETVEGYLLFRAAELTVQQGYDWFQVVDRA CCCCCCCCCEEEEEECCEEEEEECCCEECCCHHHCEEEEEEEEEHHHHHCCHHHHHHHHH TDRQSRTYVEPDPFYRPWYGPTYGYWRPSWRYYGRGYGWRTWDPFWGDPFWANRVDVRTV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEC DRYEATAEIVMGRGQKPADDPRAFDARAVIDNLRPRIQYPEPR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA