| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is hisA [H]
Identifier: 197103508
GI number: 197103508
Start: 35286
End: 36017
Strand: Direct
Name: hisA [H]
Synonym: PHZ_c0042
Alternate gene names: 197103508
Gene position: 35286-36017 (Clockwise)
Preceding gene: 197103507
Following gene: 197103509
Centisome position: 0.88
GC content: 71.58
Gene sequence:
>732_bases GTGGCGCCCTTGATCCTCTATCCCGCCATCGACCTGAAGGACGGACAGTGCGTCCGGGTGCTTCACGGCGATCTTTCCAC GGCCACGGTGTTCAACACCGACCCCGGCGCCCAGGCGAGGAGCTTCGCCGAGGCCGGCTTCCACTGGGTGCACGTGGTCG ACCTGAACGGGGCGGTGGAGGGCCACGCGGTGAACGCCGCCGCGGTCGAGGCCATCCTCTCGTCGGTGTCGATCCCGGTG CAGCTGGGCGGCGGCATCCGCACGCTGGCCGACATCGAGCGTTGGATCGAGGCCGGTGTCAGCCGGGTCATCCTGGGCAC CGTCGCGGTGAAGGAGCCCGAGGTGGTGATCGAAGCCGCGCGGCTCTTCCCCGAGCAGATCGCCGTCAGCGTCGACGTGC GCGCCGGCAAGGTGGCGGTGCAGGGCTGGACGGCCGACAGCGATCTGGATGCGATCACCGTGGCCAGGCGGTTCGAGGAC GCCGGCGTCGGCGCCCTGATCGTCACCGACATCGACCGCGACGGCACCGTCATGGGCTTCAACGTCGAGGCCTTCGGCGC CATGGCGGACGCGGTGAGCATCCCCGTGATCGCGGCCGGCGGCCTCGCCTCGGTGGACGACCTCGTGCGGCTGAAGGCCC GCAAGGGCGCGCCGATCGCCGGCGCGGTGCTGGGCCGGGCGCTCTACAACGGCGCCATCGACCCGGCCGAGGCGCTGAAG GTGGCCGCCTGA
Upstream 100 bases:
>100_bases GCTTCCCGGCGGCCGTCGCGCGCGGCAACATGGCCGGCGTCCAGTTCCACCCGGAGAAGTCGCAAGGCGCCGGCCTCTCC CTCCTCGCCGATTTCCTGGA
Downstream 100 bases:
>100_bases TGCTGAACGTGCGCGTCATCCCCTGCCTGGACGTGAAGGACGGGCGCGTGGTGAAGGGCGTGCAGTTCGTCTCGCTGCGG GACGCGGGCGATCCGGTCGA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAPLILYPAIDLKDGQCVRVLHGDLSTATVFNTDPGAQARSFAEAGFHWVHVVDLNGAVEGHAVNAAAVEAILSSVSIPV QLGGGIRTLADIERWIEAGVSRVILGTVAVKEPEVVIEAARLFPEQIAVSVDVRAGKVAVQGWTADSDLDAITVARRFED AGVGALIVTDIDRDGTVMGFNVEAFGAMADAVSIPVIAAGGLASVDDLVRLKARKGAPIAGAVLGRALYNGAIDPAEALK VAA
Sequences:
>Translated_243_residues MAPLILYPAIDLKDGQCVRVLHGDLSTATVFNTDPGAQARSFAEAGFHWVHVVDLNGAVEGHAVNAAAVEAILSSVSIPV QLGGGIRTLADIERWIEAGVSRVILGTVAVKEPEVVIEAARLFPEQIAVSVDVRAGKVAVQGWTADSDLDAITVARRFED AGVGALIVTDIDRDGTVMGFNVEAFGAMADAVSIPVIAAGGLASVDDLVRLKARKGAPIAGAVLGRALYNGAIDPAEALK VAA >Mature_242_residues APLILYPAIDLKDGQCVRVLHGDLSTATVFNTDPGAQARSFAEAGFHWVHVVDLNGAVEGHAVNAAAVEAILSSVSIPVQ LGGGIRTLADIERWIEAGVSRVILGTVAVKEPEVVIEAARLFPEQIAVSVDVRAGKVAVQGWTADSDLDAITVARRFEDA GVGALIVTDIDRDGTVMGFNVEAFGAMADAVSIPVIAAGGLASVDDLVRLKARKGAPIAGAVLGRALYNGAIDPAEALKV AA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=31.404958677686, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1788336, Length=241, Percent_Identity=22.4066390041494, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 25036; Mature: 24905
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLILYPAIDLKDGQCVRVLHGDLSTATVFNTDPGAQARSFAEAGFHWVHVVDLNGAVE CCCEEEEECEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCC GHAVNAAAVEAILSSVSIPVQLGGGIRTLADIERWIEAGVSRVILGTVAVKEPEVVIEAA CCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCHHHEEEEEEEECCCHHHHHHH RLFPEQIAVSVDVRAGKVAVQGWTADSDLDAITVARRFEDAGVGALIVTDIDRDGTVMGF HHCHHHEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEE NVEAFGAMADAVSIPVIAAGGLASVDDLVRLKARKGAPIAGAVLGRALYNGAIDPAEALK EHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHE VAA ECC >Mature Secondary Structure APLILYPAIDLKDGQCVRVLHGDLSTATVFNTDPGAQARSFAEAGFHWVHVVDLNGAVE CCEEEEECEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCC GHAVNAAAVEAILSSVSIPVQLGGGIRTLADIERWIEAGVSRVILGTVAVKEPEVVIEAA CCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCHHHEEEEEEEECCCHHHHHHH RLFPEQIAVSVDVRAGKVAVQGWTADSDLDAITVARRFEDAGVGALIVTDIDRDGTVMGF HHCHHHEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEE NVEAFGAMADAVSIPVIAAGGLASVDDLVRLKARKGAPIAGAVLGRALYNGAIDPAEALK EHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHE VAA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]