| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103477
Identifier: 197103477
GI number: 197103477
Start: 8134
End: 9870
Strand: Direct
Name: 197103477
Synonym: PHZ_c0011
Alternate gene names: NA
Gene position: 8134-9870 (Clockwise)
Preceding gene: 197103476
Following gene: 197103478
Centisome position: 0.2
GC content: 75.24
Gene sequence:
>1737_bases GTGGCCGGGCATGACCCCGGCCGACGCGGAAGCGGTCGCAGCGGCGATCCGGAGGACGGAGGAGGGCGGCTCGTGAGCGC GGCCGGCCTCCTGGAGCCCCTCGAGCAGCAGGCGGCGCTGTTCGCCGCCGCGCCCAACCGATTCAGCCTCATGAAGGCCG CGCGGGGAGCGCCCGCGGGCGAGCGCACGCTCCAGGTGCTGCGCAATCACGCGTTCGAGGGCGCCGCGAGCGTCCTGCCC GCCTTCCTGGGCTTCGCGGGCGCGCCGATGCGGGTCGAGATCGGCGACTACGACGACAGCCTGAACCTGCCCGAGGAGGC CGGGGACGCCCGCCTGGTCTGGCTGGACTACGCCCGCTACGGCCGGCTTGACGACGAGGCGCTCGTCGCCTGGATCGTCG GGCGTCTCGACGCCCTGCGCGCCGCCGCGGCGGGGCCGCTGATCGTGAGCAATGCGCCCGACGCGGGCGACCGCTACGCG GCGCTGAACGGGGCCCTGGCGGCCTGGGCCGAACGCACCCCGGCCGCCGCGGTCCTGCGCCTGGACGAGATCGCCCGGCG ACTGGGAGAGCGGACGTTCGACGAGGCCCGCGCCCAGGCGACCGGCACGCGGCTCGGCGAGGCCGCGATTCTGGAATCGG CCCGGGCCCTCGCCTTCGAGATCCTGGCCGGCTTCTTCACCCTGCCGGTCAAGGCGCTGGCGGTCGACCTCGACAACACG ATCTACGAAGGCGTCCTCGGCGAGGACGGGACCTCGGGCGTGCGCCTCACCGCGGACCACGCCGCGCTGCAGGCGGCCAT CGTCCGCTGGGCCGAGCGGGGCGTGCTGGTGGCGGTGGTCTCGCGCAACGAGGCCGAGGACGTGGCCGAGCTGTTCCGCG CCCGCGCCGACTTTCCCTTGAAGGCCGAGCACGTCAGCGCCTGGCAGGTGAGCTGGGGGGCCAAGTCCGACGCGGTTCGC GCGGCGGCGAAGGCGTTCAACATCGGGCCCGACGCGGTGCTGATGATCGACGACAACCTCGGCGAGCTCGTCGAGGCCGG CGCCCGGGTCCCCGGCCTGCGCCTGCTGCACGCCGGCCCCACCGCGGCCGACGCAGCCCGGGCGCTCGACCTCTATCCCG GCCTGCCCCGCGGCAAGGCGACCTTCGCCGGGCGGGCCGCCGACATCGCCGCCAACGCCGAGCGCGAGGCCCTCGCCCGC GAGCTGGACGAGGAGGAATACCTGCGGGCGCTCCAGGCCGAGCTGGTCCTCAGCCTGGATCCGGCCGAGGACCGCGAGCG GCTGGCCGAGATCAGCCGCAAGACCAACCAGTTCAACTTGGCGCTCGCCCGCCTCGACGAGACGGCGGTGGACGAATACC TCGGCCGCGATGACCGGCTCGTGGCCCACGTCCGGCTGAGCGACCGGCTGGCGGACTCCGGCTCGGTCGCCGCGCTCTTC GCGCGGCGGGACGGCGACACCCTCGTGGTGGACGAGCTCTGCATCTCGTGCCGGGCGCTTGGCCGGCGGCTGGAGGACGT GATGGTCGCCGAGGCGCTCCGGCGGGGGGTCGAGGCGCTCGGCGCGCGCCGGGCCGCCTTCGCCTGGCGCCGCGGCCCCC GGAACGATCCGGCGCTGGAGTGGGCCGCTCGCTTCACGGGCCGCCCGCTGGAAGGCGAGGAAGGACTGGTCGAGGCGCCC GGCTCGGCGCTAGAGGGGCCGTCCGGCGCCCCCGTGACCGTGAAATGGACCAACTGA
Upstream 100 bases:
>100_bases CGCCGTGCCACCTGCAGCCGGCGTTCGCCCACCTGGGCTTCCGGGCCGGGCAGTTCCCGCTCGCCGAGCGGCTGGCGGCC GAGGTGCTCTCGCTGCCCAT
Downstream 100 bases:
>100_bases TGCCCGCCTCCGTCGACGAAACCCTCGCCGAGATCCTCAGCCTGGTGCTGGAGCGCCCGGTCGCGCCGGGCGAGGACCTG CGCCGCGAGGACGAGGCGCG
Product: putative HAD-superfamily phosphatase subfamily protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Modular Polyketide Synthase; Amino Acid Adenylation Domain Protein; Polyketide Synthase Protein; Polyketide Synthase Subunit; Modular Polyketide Synthase Type I PKS; HAD-Superfamily Phosphatase Subfamily Protein; HAD-Superfamily Protein; Fkbh Like Protein; Peptide Synthetase; HAD Family Phosphatase; HAD Family Phosphatase FbkH
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MAGHDPGRRGSGRSGDPEDGGGRLVSAAGLLEPLEQQAALFAAAPNRFSLMKAARGAPAGERTLQVLRNHAFEGAASVLP AFLGFAGAPMRVEIGDYDDSLNLPEEAGDARLVWLDYARYGRLDDEALVAWIVGRLDALRAAAAGPLIVSNAPDAGDRYA ALNGALAAWAERTPAAAVLRLDEIARRLGERTFDEARAQATGTRLGEAAILESARALAFEILAGFFTLPVKALAVDLDNT IYEGVLGEDGTSGVRLTADHAALQAAIVRWAERGVLVAVVSRNEAEDVAELFRARADFPLKAEHVSAWQVSWGAKSDAVR AAAKAFNIGPDAVLMIDDNLGELVEAGARVPGLRLLHAGPTAADAARALDLYPGLPRGKATFAGRAADIAANAEREALAR ELDEEEYLRALQAELVLSLDPAEDRERLAEISRKTNQFNLALARLDETAVDEYLGRDDRLVAHVRLSDRLADSGSVAALF ARRDGDTLVVDELCISCRALGRRLEDVMVAEALRRGVEALGARRAAFAWRRGPRNDPALEWAARFTGRPLEGEEGLVEAP GSALEGPSGAPVTVKWTN
Sequences:
>Translated_578_residues MAGHDPGRRGSGRSGDPEDGGGRLVSAAGLLEPLEQQAALFAAAPNRFSLMKAARGAPAGERTLQVLRNHAFEGAASVLP AFLGFAGAPMRVEIGDYDDSLNLPEEAGDARLVWLDYARYGRLDDEALVAWIVGRLDALRAAAAGPLIVSNAPDAGDRYA ALNGALAAWAERTPAAAVLRLDEIARRLGERTFDEARAQATGTRLGEAAILESARALAFEILAGFFTLPVKALAVDLDNT IYEGVLGEDGTSGVRLTADHAALQAAIVRWAERGVLVAVVSRNEAEDVAELFRARADFPLKAEHVSAWQVSWGAKSDAVR AAAKAFNIGPDAVLMIDDNLGELVEAGARVPGLRLLHAGPTAADAARALDLYPGLPRGKATFAGRAADIAANAEREALAR ELDEEEYLRALQAELVLSLDPAEDRERLAEISRKTNQFNLALARLDETAVDEYLGRDDRLVAHVRLSDRLADSGSVAALF ARRDGDTLVVDELCISCRALGRRLEDVMVAEALRRGVEALGARRAAFAWRRGPRNDPALEWAARFTGRPLEGEEGLVEAP GSALEGPSGAPVTVKWTN >Mature_577_residues AGHDPGRRGSGRSGDPEDGGGRLVSAAGLLEPLEQQAALFAAAPNRFSLMKAARGAPAGERTLQVLRNHAFEGAASVLPA FLGFAGAPMRVEIGDYDDSLNLPEEAGDARLVWLDYARYGRLDDEALVAWIVGRLDALRAAAAGPLIVSNAPDAGDRYAA LNGALAAWAERTPAAAVLRLDEIARRLGERTFDEARAQATGTRLGEAAILESARALAFEILAGFFTLPVKALAVDLDNTI YEGVLGEDGTSGVRLTADHAALQAAIVRWAERGVLVAVVSRNEAEDVAELFRARADFPLKAEHVSAWQVSWGAKSDAVRA AAKAFNIGPDAVLMIDDNLGELVEAGARVPGLRLLHAGPTAADAARALDLYPGLPRGKATFAGRAADIAANAEREALARE LDEEEYLRALQAELVLSLDPAEDRERLAEISRKTNQFNLALARLDETAVDEYLGRDDRLVAHVRLSDRLADSGSVAALFA RRDGDTLVVDELCISCRALGRRLEDVMVAEALRRGVEALGARRAAFAWRRGPRNDPALEWAARFTGRPLEGEEGLVEAPG SALEGPSGAPVTVKWTN
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61539; Mature: 61408
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGHDPGRRGSGRSGDPEDGGGRLVSAAGLLEPLEQQAALFAAAPNRFSLMKAARGAPAG CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH ERTLQVLRNHAFEGAASVLPAFLGFAGAPMRVEIGDYDDSLNLPEEAGDARLVWLDYARY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHC GRLDDEALVAWIVGRLDALRAAAAGPLIVSNAPDAGDRYAALNGALAAWAERTPAAAVLR CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHH LDEIARRLGERTFDEARAQATGTRLGEAAILESARALAFEILAGFFTLPVKALAVDLDNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYEGVLGEDGTSGVRLTADHAALQAAIVRWAERGVLVAVVSRNEAEDVAELFRARADFPL HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCC KAEHVSAWQVSWGAKSDAVRAAAKAFNIGPDAVLMIDDNLGELVEAGARVPGLRLLHAGP CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCEEEEECCC TAADAARALDLYPGLPRGKATFAGRAADIAANAEREALARELDEEEYLRALQAELVLSLD CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEECC PAEDRERLAEISRKTNQFNLALARLDETAVDEYLGRDDRLVAHVRLSDRLADSGSVAALF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEEE ARRDGDTLVVDELCISCRALGRRLEDVMVAEALRRGVEALGARRAAFAWRRGPRNDPALE EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WAARFTGRPLEGEEGLVEAPGSALEGPSGAPVTVKWTN HHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECC >Mature Secondary Structure AGHDPGRRGSGRSGDPEDGGGRLVSAAGLLEPLEQQAALFAAAPNRFSLMKAARGAPAG CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH ERTLQVLRNHAFEGAASVLPAFLGFAGAPMRVEIGDYDDSLNLPEEAGDARLVWLDYARY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHC GRLDDEALVAWIVGRLDALRAAAAGPLIVSNAPDAGDRYAALNGALAAWAERTPAAAVLR CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHH LDEIARRLGERTFDEARAQATGTRLGEAAILESARALAFEILAGFFTLPVKALAVDLDNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYEGVLGEDGTSGVRLTADHAALQAAIVRWAERGVLVAVVSRNEAEDVAELFRARADFPL HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCC KAEHVSAWQVSWGAKSDAVRAAAKAFNIGPDAVLMIDDNLGELVEAGARVPGLRLLHAGP CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCEEEEECCC TAADAARALDLYPGLPRGKATFAGRAADIAANAEREALARELDEEEYLRALQAELVLSLD CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEECC PAEDRERLAEISRKTNQFNLALARLDETAVDEYLGRDDRLVAHVRLSDRLADSGSVAALF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEEE ARRDGDTLVVDELCISCRALGRRLEDVMVAEALRRGVEALGARRAAFAWRRGPRNDPALE EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WAARFTGRPLEGEEGLVEAPGSALEGPSGAPVTVKWTN HHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA