Definition Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome.
Accession NC_011134
Length 2,024,171

Click here to switch to the map view.

The map label for this gene is yvjA [H]

Identifier: 195979044

GI number: 195979044

Start: 2015641

End: 2015925

Strand: Direct

Name: yvjA [H]

Synonym: Sez_1956

Alternate gene names: 195979044

Gene position: 2015641-2015925 (Clockwise)

Preceding gene: 195979043

Following gene: 195979045

Centisome position: 99.58

GC content: 42.81

Gene sequence:

>285_bases
ATGATTATTTCAAAGGAATATCAGGCCATCAAGGCTTATATTACAGGTGTTATGGATCGTGGTGTCTCTAAGATTCCTAT
CCGAGGGGGCTACACAACATCAGATAAGATCATGCTAATGGCCATTGTTTCTGGCTATGAGTTGCCAGCTTTACAGGAAA
AAATTCTAGAAATCGATGACACTGCCTTTATCGTTGTCATGCCAGCAGCACAGGTCATGGGACGTGGCTTCAGCTTAACC
AAGCATTACAAACTAGAGGACAAAGATGTGCTGCTGCCTATGTAA

Upstream 100 bases:

>100_bases
CCCTATCTGCTGATGATGTCATGTACTCTACGATCGGGCTGCTCGTTTATGGCTATGTCATTAGTGTCATGGAAAATGGC
TTTGACTCTTCTAAGATGTC

Downstream 100 bases:

>100_bases
GCCCTAAGCCCTTTTCTGATTGAAAAAAGGGGCTTTTTTAGGTACAATGAGGATTAGATAAATAAAATGAGGTGACAAAT
TGCTAACAGTTTCTGACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MIISKEYQAIKAYITGVMDRGVSKIPIRGGYTTSDKIMLMAIVSGYELPALQEKILEIDDTAFIVVMPAAQVMGRGFSLT
KHYKLEDKDVLLPM

Sequences:

>Translated_94_residues
MIISKEYQAIKAYITGVMDRGVSKIPIRGGYTTSDKIMLMAIVSGYELPALQEKILEIDDTAFIVVMPAAQVMGRGFSLT
KHYKLEDKDVLLPM
>Mature_94_residues
MIISKEYQAIKAYITGVMDRGVSKIPIRGGYTTSDKIMLMAIVSGYELPALQEKILEIDDTAFIVVMPAAQVMGRGFSLT
KHYKLEDKDVLLPM

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 10469; Mature: 10469

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISKEYQAIKAYITGVMDRGVSKIPIRGGYTTSDKIMLMAIVSGYELPALQEKILEIDD
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCC
TAFIVVMPAAQVMGRGFSLTKHYKLEDKDVLLPM
CEEEEEECCHHHHCCCCCCEEEEEECCCEEECCC
>Mature Secondary Structure
MIISKEYQAIKAYITGVMDRGVSKIPIRGGYTTSDKIMLMAIVSGYELPALQEKILEIDD
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCC
TAFIVVMPAAQVMGRGFSLTKHYKLEDKDVLLPM
CEEEEEECCHHHHCCCCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]