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The map label for this gene is pepA [H]

Identifier: 195978942

GI number: 195978942

Start: 1915141

End: 1916208

Strand: Direct

Name: pepA [H]

Synonym: Sez_1849

Alternate gene names: 195978942

Gene position: 1915141-1916208 (Clockwise)

Preceding gene: 195978938

Following gene: 195978943

Centisome position: 94.61

GC content: 47.19

Gene sequence:

>1068_bases
ATGATTGATTTATTTTCAAAAATTAAAGAAGTTACTGAATTAGACGGCATCGCCAGCTACGAGCACACTGTTCGGGATTA
CTTACGCGCTAAGATCACGCCGCTTGTTGACCGAGTGAGGGTTGACGGACTCGGCGGCATATTTGGGATAAGAGAAAGCA
AGGCGGATCAAGCCCCTCGCATTCTTGTGGCTGCTCACATGGACGAGGTTGGCTTTATGGTGAGCGAGATTAAAGCTGAT
GGAACACTGCGGGTTGTTGAAATTGGCGGCTGGAATCCGCTAGTTGTTAGCTCACAGCGCTTTACCTTATACACTCGCGC
TGGCCAAGCCATTCCTGTTATTTCAGGCTCAGTTCCTCCCCATTTTCTGCGCGGGGCAAATGGTGCTGCTAATCTGCCAG
CGGTTTCAGATATTGTTTTTGATGGTGGCTTTACAGACAAGGCTGAAGCCGAAAGCTTTGGCATCACACCAGGAGATATT
ATTGTACCGCAGTCTGAAACCATTTTAACTGCCAATAAAAAGAATATCATCTCAAAGGCCTGGGACAACCGCTATGGTGT
TCTCATGGTCACTGAGCTGCTAGAAGCCTTAAAAGACCAGACACTTCACAACACTCTTATTGCTGGAGCAAATGTCCAAG
AAGAAGTCGGGCTTCGTGGTGCCCATGTTTCAGCCACTACATTTGATCCTGAGCTTTTCTTTGCTGTTGATTGCTCACCT
GCTGGTGATATTTATGGCAATCCTGGCCATATTGGTGATGGAACCCTTCTACGCTTTTACGATCCCGGACACATCATGCT
TAAGAACATGCGAGACTTCCTATTAACCACCGCTGAGGAGGCTGGGGTTGCCTTCCAATATTATTGTGGTAAAGGCGGTA
CAGACGCTGGTGCTGCCCACCTCAAAAATGGCGGTATCCCTTCAACTACAATCGGTGTCTGCGCTCGCTACATTCACTCA
CATCAGAGCTTGTACGCCTTAGATGATTTCGTAGAAGCACAGGCCTTTTTGCAAGCCATTGTCAAAAAGCTTGACCGCTC
AACAGTTGATTTAATCAAGAAATACTAG

Upstream 100 bases:

>100_bases
CTTTTCCTATGCTCAAGCTGTTTCCCATTCTTCACTAAAAAATGATAGAATAGAGGCAGACGTGATACCTTTAATCTTAC
ATGACAAATGGAGTATACAA

Downstream 100 bases:

>100_bases
GAAGGATAAGGCTAAAATGCGAATCTAAGGTTCAATGAGCACTCTAGCCTATTGAGCCTTTATTCATTTTTAGGAACATT
ATTATGAAAATTGGATTTAT

Product: glutamyl aminopeptidase PepA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIDLFSKIKEVTELDGIASYEHTVRDYLRAKITPLVDRVRVDGLGGIFGIRESKADQAPRILVAAHMDEVGFMVSEIKAD
GTLRVVEIGGWNPLVVSSQRFTLYTRAGQAIPVISGSVPPHFLRGANGAANLPAVSDIVFDGGFTDKAEAESFGITPGDI
IVPQSETILTANKKNIISKAWDNRYGVLMVTELLEALKDQTLHNTLIAGANVQEEVGLRGAHVSATTFDPELFFAVDCSP
AGDIYGNPGHIGDGTLLRFYDPGHIMLKNMRDFLLTTAEEAGVAFQYYCGKGGTDAGAAHLKNGGIPSTTIGVCARYIHS
HQSLYALDDFVEAQAFLQAIVKKLDRSTVDLIKKY

Sequences:

>Translated_355_residues
MIDLFSKIKEVTELDGIASYEHTVRDYLRAKITPLVDRVRVDGLGGIFGIRESKADQAPRILVAAHMDEVGFMVSEIKAD
GTLRVVEIGGWNPLVVSSQRFTLYTRAGQAIPVISGSVPPHFLRGANGAANLPAVSDIVFDGGFTDKAEAESFGITPGDI
IVPQSETILTANKKNIISKAWDNRYGVLMVTELLEALKDQTLHNTLIAGANVQEEVGLRGAHVSATTFDPELFFAVDCSP
AGDIYGNPGHIGDGTLLRFYDPGHIMLKNMRDFLLTTAEEAGVAFQYYCGKGGTDAGAAHLKNGGIPSTTIGVCARYIHS
HQSLYALDDFVEAQAFLQAIVKKLDRSTVDLIKKY
>Mature_355_residues
MIDLFSKIKEVTELDGIASYEHTVRDYLRAKITPLVDRVRVDGLGGIFGIRESKADQAPRILVAAHMDEVGFMVSEIKAD
GTLRVVEIGGWNPLVVSSQRFTLYTRAGQAIPVISGSVPPHFLRGANGAANLPAVSDIVFDGGFTDKAEAESFGITPGDI
IVPQSETILTANKKNIISKAWDNRYGVLMVTELLEALKDQTLHNTLIAGANVQEEVGLRGAHVSATTFDPELFFAVDCSP
AGDIYGNPGHIGDGTLLRFYDPGHIMLKNMRDFLLTTAEEAGVAFQYYCGKGGTDAGAAHLKNGGIPSTTIGVCARYIHS
HQSLYALDDFVEAQAFLQAIVKKLDRSTVDLIKKY

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=354, Percent_Identity=29.6610169491525, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1788727, Length=351, Percent_Identity=31.9088319088319, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI87082417, Length=354, Percent_Identity=27.4011299435028, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017538
- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: =3.4.11.7 [H]

Molecular weight: Translated: 38399; Mature: 38399

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLFSKIKEVTELDGIASYEHTVRDYLRAKITPLVDRVRVDGLGGIFGIRESKADQAPR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCE
ILVAAHMDEVGFMVSEIKADGTLRVVEIGGWNPLVVSSQRFTLYTRAGQAIPVISGSVPP
EEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEECCCCEEEEEECCCCH
HFLRGANGAANLPAVSDIVFDGGFTDKAEAESFGITPGDIIVPQSETILTANKKNIISKA
HHHCCCCCCCCCCCHHHEEECCCCCCCCCHHHCCCCCCCEECCCCCEEEECCHHHHHHHH
WDNRYGVLMVTELLEALKDQTLHNTLIAGANVQEEVGLRGAHVSATTFDPELFFAVDCSP
HCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCEEEEEEECCEEEEEEECCC
AGDIYGNPGHIGDGTLLRFYDPGHIMLKNMRDFLLTTAEEAGVAFQYYCGKGGTDAGAAH
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCHHH
LKNGGIPSTTIGVCARYIHSHQSLYALDDFVEAQAFLQAIVKKLDRSTVDLIKKY
HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MIDLFSKIKEVTELDGIASYEHTVRDYLRAKITPLVDRVRVDGLGGIFGIRESKADQAPR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCE
ILVAAHMDEVGFMVSEIKADGTLRVVEIGGWNPLVVSSQRFTLYTRAGQAIPVISGSVPP
EEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEECCCCEEEEEECCCCH
HFLRGANGAANLPAVSDIVFDGGFTDKAEAESFGITPGDIIVPQSETILTANKKNIISKA
HHHCCCCCCCCCCCHHHEEECCCCCCCCCHHHCCCCCCCEECCCCCEEEECCHHHHHHHH
WDNRYGVLMVTELLEALKDQTLHNTLIAGANVQEEVGLRGAHVSATTFDPELFFAVDCSP
HCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCEEEEEEECCEEEEEEECCC
AGDIYGNPGHIGDGTLLRFYDPGHIMLKNMRDFLLTTAEEAGVAFQYYCGKGGTDAGAAH
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCHHH
LKNGGIPSTTIGVCARYIHSHQSLYALDDFVEAQAFLQAIVKKLDRSTVDLIKKY
HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8535515 [H]