Click here to switch to the map view.

The map label for this gene is 195978646

Identifier: 195978646

GI number: 195978646

Start: 1587436

End: 1587804

Strand: Direct

Name: 195978646

Synonym: Sez_1544

Alternate gene names: NA

Gene position: 1587436-1587804 (Clockwise)

Preceding gene: 195978645

Following gene: 195978650

Centisome position: 78.42

GC content: 39.02

Gene sequence:

>369_bases
ATGAAAAGCAATCAAATCATCATTAGAAAGGCTCATATGGAACAGCTTAAGAAAACCACAGAATTACTCGGAATAAAAAA
CACTATCCAACTGTTGACTGTCCTAAATCCTCACCCCCACATCGTTATCAATCCTAAGCTTGATTATTCAGTTCTCTTAT
GCCCTCACTACAAAGGAAACATGAGCAAACAAGACTTCCAAAAAGCCTCTAAAATCCCTATCTTCGATTGCCAAAGCTTT
CCAACACTGCTTCAACTCAAAAAACACTGCTTTCAGTGGAAAGCCAGTTCTAAAGTGAGCCTTGCTCAAACTCCTTTTGA
TTTTCACATCACAAAAAAGAGCACCAACCTGGTCCTCTCTAGATGTTAG

Upstream 100 bases:

>100_bases
TGACCCTTTCAAAAAAGCTCTGTAATCTCTGTAGTGAGTCAGTCCACTGCAGGGGTTATAGAGCTTTTAACTATACAAAA
ACAAACCCATATGACTTATC

Downstream 100 bases:

>100_bases
TTATTAGTCAACCCACTATAGTTGACAAAAATCCAAATAGTCCGTACGGGATTCGAACCCGTGTTACCGCCGTGAAAAGG
CGGTGTCTTAACCCCTTGAC

Product: transposase, ISL3 family

Products: NA

Alternate protein names: Transposase Putative; Transposase ISL3 Family

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKSNQIIIRKAHMEQLKKTTELLGIKNTIQLLTVLNPHPHIVINPKLDYSVLLCPHYKGNMSKQDFQKASKIPIFDCQSF
PTLLQLKKHCFQWKASSKVSLAQTPFDFHITKKSTNLVLSRC

Sequences:

>Translated_122_residues
MKSNQIIIRKAHMEQLKKTTELLGIKNTIQLLTVLNPHPHIVINPKLDYSVLLCPHYKGNMSKQDFQKASKIPIFDCQSF
PTLLQLKKHCFQWKASSKVSLAQTPFDFHITKKSTNLVLSRC
>Mature_122_residues
MKSNQIIIRKAHMEQLKKTTELLGIKNTIQLLTVLNPHPHIVINPKLDYSVLLCPHYKGNMSKQDFQKASKIPIFDCQSF
PTLLQLKKHCFQWKASSKVSLAQTPFDFHITKKSTNLVLSRC

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14045; Mature: 14045

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNQIIIRKAHMEQLKKTTELLGIKNTIQLLTVLNPHPHIVINPKLDYSVLLCPHYKGN
CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCCC
MSKQDFQKASKIPIFDCQSFPTLLQLKKHCFQWKASSKVSLAQTPFDFHITKKSTNLVLS
CCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEE
RC
CC
>Mature Secondary Structure
MKSNQIIIRKAHMEQLKKTTELLGIKNTIQLLTVLNPHPHIVINPKLDYSVLLCPHYKGN
CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCCC
MSKQDFQKASKIPIFDCQSFPTLLQLKKHCFQWKASSKVSLAQTPFDFHITKKSTNLVLS
CCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCEEEE
RC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA