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The map label for this gene is 195978644

Identifier: 195978644

GI number: 195978644

Start: 1585682

End: 1586215

Strand: Direct

Name: 195978644

Synonym: Sez_1542

Alternate gene names: NA

Gene position: 1585682-1586215 (Clockwise)

Preceding gene: 195978643

Following gene: 195978645

Centisome position: 78.34

GC content: 37.08

Gene sequence:

>534_bases
ATGAAATTACCTAAAGAAGGCGACTTTATTACAATTCAAAGTTATAAGCATGATGGTAGATTGCACCGGACCTGGCGCGA
TACTATGGTACTAAAAACAACTGAAAATGCTCTGATTGGAGTTAATGATCACACACTTGTTACTGAAAGCGACGGCAGGC
GATGGGTGACACGAGAGCCTGCGATTGTTTATTTTCATAAAAAATACTGGTTCAATATTATAGCAATGATTCGAGATAAT
GGTGTTTCCTATTATTGTAACCTTGCAAGTCCATACCTGATGGACGCAGAAGCACTCAAGTATATTGACTACGATCTCGA
TGTCAAAGTCTTTGCAGACGGTGAAAAGAGATTGCTTGATGTTGACGAATATGAAATGCACAAGCAAGAAATGCATTATT
CACCCAATTTGGACTTTATTTTAAAAGAGAATGTTAAGCTATTAGTCGACTGGATCAATAAAGAAAAAGGACCATTTTCA
AAAGCCTATGTCAGTATTTGGTACAAACGTTATCTTGAACTGAAGAATCGTTAG

Upstream 100 bases:

>100_bases
TTTAGGCATTTGTCAGATCATATTGTCCAAAACAGTGATTTATTTTCTCAATTATGGTAAACTATAGAGGATAAGTTTAA
TTGTAGAAAGTTGGTAAGGC

Downstream 100 bases:

>100_bases
TCGTTGTCTAGCACTCCACAGGGAGTGCTTTATTTAATAGCTAGTATAACATCATATCAGTAAGTTGAGCTGGGGCTTAC
AACCTGTCAGCATTTGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKLPKEGDFITIQSYKHDGRLHRTWRDTMVLKTTENALIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GVSYYCNLASPYLMDAEALKYIDYDLDVKVFADGEKRLLDVDEYEMHKQEMHYSPNLDFILKENVKLLVDWINKEKGPFS
KAYVSIWYKRYLELKNR

Sequences:

>Translated_177_residues
MKLPKEGDFITIQSYKHDGRLHRTWRDTMVLKTTENALIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GVSYYCNLASPYLMDAEALKYIDYDLDVKVFADGEKRLLDVDEYEMHKQEMHYSPNLDFILKENVKLLVDWINKEKGPFS
KAYVSIWYKRYLELKNR
>Mature_177_residues
MKLPKEGDFITIQSYKHDGRLHRTWRDTMVLKTTENALIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIRDN
GVSYYCNLASPYLMDAEALKYIDYDLDVKVFADGEKRLLDVDEYEMHKQEMHYSPNLDFILKENVKLLVDWINKEKGPFS
KAYVSIWYKRYLELKNR

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007295
- InterPro:   IPR016882 [H]

Pfam domain/function: PF04167 DUF402 [H]

EC number: NA

Molecular weight: Translated: 21197; Mature: 21197

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPKEGDFITIQSYKHDGRLHRTWRDTMVLKTTENALIGVNDHTLVTESDGRRWVTREP
CCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEEECCC
AIVYFHKKYWFNIIAMIRDNGVSYYCNLASPYLMDAEALKYIDYDLDVKVFADGEKRLLD
EEEEEEHHHHEEEEEEEECCCCEEEEECCCCEEECHHHHHEECCCCEEEEEECCCCEEEC
VDEYEMHKQEMHYSPNLDFILKENVKLLVDWINKEKGPFSKAYVSIWYKRYLELKNR
CHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLPKEGDFITIQSYKHDGRLHRTWRDTMVLKTTENALIGVNDHTLVTESDGRRWVTREP
CCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCEEEECCCCEEEECCCCCEEEECCC
AIVYFHKKYWFNIIAMIRDNGVSYYCNLASPYLMDAEALKYIDYDLDVKVFADGEKRLLD
EEEEEEHHHHEEEEEEEECCCCEEEEECCCCEEECHHHHHEECCCCEEEEEECCCCEEEC
VDEYEMHKQEMHYSPNLDFILKENVKLLVDWINKEKGPFSKAYVSIWYKRYLELKNR
CHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA