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The map label for this gene is comB [H]

Identifier: 195978626

GI number: 195978626

Start: 1565949

End: 1567349

Strand: Direct

Name: comB [H]

Synonym: Sez_1524

Alternate gene names: 195978626

Gene position: 1565949-1567349 (Clockwise)

Preceding gene: 195978625

Following gene: 195978627

Centisome position: 77.36

GC content: 38.54

Gene sequence:

>1401_bases
GTGGATTTTATTACCACCTATTTAGTGAATAAGGAGACAATCATGAATCCCAATATGTTTAAAAGTGCGGAATTCTACCA
AAGACGCTATCATCATTTGACAACATTCTTAACAATCCCCTTAGCCCTCTTGTTGACTTTTCTTATCCTTTTTTCTTGCT
TTGCTTATAAAGAAATAACGGTAACGTCCTACGGAGAAATCACTCCCACTCAAGTCATTGCAACAGTCCAATCTATTAGC
AATAATCCTATAATTGCGAACCATCTCACCAATAACCAGCCAATCAAACAAGGAGACTCTATTATTCAATATGCTAAGGA
CTTAGAAGAGGCTCAAAAGCAGGTACTTGAGAAACAATTAGCCACCTACGAAAAGCAAAAAAGCAGCCTTAATACTCTAT
TGTTAAGCTTAAAACAAGGCCAAAACCTTTTTCAGAGCGATGATCAATTTGGTTACGTCAATACCTTTAATCATTTCATG
AGCCAAGCCCAAGATATTGACCTTGGTTTCTCAAAAATAAAGGCAGAGACCAGCCAGCAGGCCCAGCTGATTCAGGACTC
TATTGTTGCTATCAATCAGCAAATAAACGGTATCTCTCAACAAATAGCAGATTATGAAGAGCTTCGAGCTGCAGTCATTA
ACCAATCCGATAGTCTATCCTCCAATAACCCACATCAAGCCACCCTTGATGCCTATCTCTCTCAATCTCAAACAAGCCAA
GAGACTGCCACTAATCAGCTTTTATTTCAAATAGACCAAAGCCTTTTAAGTCTAAAAGCTTCTATGGATAGCCTTAATAG
GCAACGTGCTAATCTGCATCAATCTACCAGCTATGATAATAGCCTCAACACAAAGCTAGAAATACTCCGAACACAGTTTT
TGATAACAGCCTCTCAGCAGTTAACAGACGTCAATCATCATATTACTGAGCTCAAGGCACAATTAGAGCAAGCCACTCTT
CAGGTAAACAATCTGGTGATCAAAGCCCCAAAAAGTGGCATTGTTCAGCTCAATAGTGCTTTTGAAGGCAAAACTAGTAT
TCCAATCGGTCATGATATTGCCTACATTTATCCTAGCCTCAAACAAACAAAACAAGCCTTGCTCACTTACTATGTCAGCT
CTGAATCTGTTTCTCTCCTTAAGAAAAACCAGATTGTCAGACTAGCTCTAGATAGACATGGAAATCAACCGATAGTCATT
ACGGGAACCATTAAAACCATTGATGAGCTAGCGACCAAAACCAAGCAGGGAAATCTTTTTAAGGTTACAGCCAAACTAAC
ACTTTCTGAAAAAGAAAGCACTACTATTCAATATGGTCAGCAGGGACGAGTGATAAGTGTTATTGCCAAAAAAACATTCT
TTGACTTTTATAAGGACAAGCTCTTTAAAGTGACAGAATAA

Upstream 100 bases:

>100_bases
GCCCACCGGCTTAGTATCGCAGAGCGCACTGATCAGATTGTTGTTCTTAATCAAGGGCAAATCATTGAAACAGGCAGCCA
CCAGGAATTAATGAAACAAG

Downstream 100 bases:

>100_bases
CCATTTAGCGCTTTTCAACGACCATTTAGGACATATAGTACAACAAAGAGTCAAGATAAGCTATAATAACATAGACAGTA
TTTAAAAGGAGCTTTTAATA

Product: peptide ABC transporter BlpC/ComB-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MDFITTYLVNKETIMNPNMFKSAEFYQRRYHHLTTFLTIPLALLLTFLILFSCFAYKEITVTSYGEITPTQVIATVQSIS
NNPIIANHLTNNQPIKQGDSIIQYAKDLEEAQKQVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFM
SQAQDIDLGFSKIKAETSQQAQLIQDSIVAINQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLDAYLSQSQTSQ
ETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILRTQFLITASQQLTDVNHHITELKAQLEQATL
QVNNLVIKAPKSGIVQLNSAFEGKTSIPIGHDIAYIYPSLKQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPIVI
TGTIKTIDELATKTKQGNLFKVTAKLTLSEKESTTIQYGQQGRVISVIAKKTFFDFYKDKLFKVTE

Sequences:

>Translated_466_residues
MDFITTYLVNKETIMNPNMFKSAEFYQRRYHHLTTFLTIPLALLLTFLILFSCFAYKEITVTSYGEITPTQVIATVQSIS
NNPIIANHLTNNQPIKQGDSIIQYAKDLEEAQKQVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFM
SQAQDIDLGFSKIKAETSQQAQLIQDSIVAINQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLDAYLSQSQTSQ
ETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILRTQFLITASQQLTDVNHHITELKAQLEQATL
QVNNLVIKAPKSGIVQLNSAFEGKTSIPIGHDIAYIYPSLKQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPIVI
TGTIKTIDELATKTKQGNLFKVTAKLTLSEKESTTIQYGQQGRVISVIAKKTFFDFYKDKLFKVTE
>Mature_466_residues
MDFITTYLVNKETIMNPNMFKSAEFYQRRYHHLTTFLTIPLALLLTFLILFSCFAYKEITVTSYGEITPTQVIATVQSIS
NNPIIANHLTNNQPIKQGDSIIQYAKDLEEAQKQVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFM
SQAQDIDLGFSKIKAETSQQAQLIQDSIVAINQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLDAYLSQSQTSQ
ETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILRTQFLITASQQLTDVNHHITELKAQLEQATL
QVNNLVIKAPKSGIVQLNSAFEGKTSIPIGHDIAYIYPSLKQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPIVI
TGTIKTIDELATKTKQGNLFKVTAKLTLSEKESTTIQYGQQGRVISVIAKKTFFDFYKDKLFKVTE

Specific function: Required for induction of competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52512; Mature: 52512

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFITTYLVNKETIMNPNMFKSAEFYQRRYHHLTTFLTIPLALLLTFLILFSCFAYKEIT
CCCHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VTSYGEITPTQVIATVQSISNNPIIANHLTNNQPIKQGDSIIQYAKDLEEAQKQVLEKQL
EECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFMSQAQDIDLGFSKIKAETSQQ
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AQLIQDSIVAINQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLDAYLSQSQTSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH
ETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILRTQFLITASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LTDVNHHITELKAQLEQATLQVNNLVIKAPKSGIVQLNSAFEGKTSIPIGHDIAYIYPSL
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCCCHHHCCCCH
KQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPIVITGTIKTIDELATKTKQGNLF
HHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEE
KVTAKLTLSEKESTTIQYGQQGRVISVIAKKTFFDFYKDKLFKVTE
EEEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFITTYLVNKETIMNPNMFKSAEFYQRRYHHLTTFLTIPLALLLTFLILFSCFAYKEIT
CCCHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VTSYGEITPTQVIATVQSISNNPIIANHLTNNQPIKQGDSIIQYAKDLEEAQKQVLEKQL
EECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFMSQAQDIDLGFSKIKAETSQQ
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AQLIQDSIVAINQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLDAYLSQSQTSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH
ETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILRTQFLITASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LTDVNHHITELKAQLEQATLQVNNLVIKAPKSGIVQLNSAFEGKTSIPIGHDIAYIYPSL
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCCCHHHCCCCH
KQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPIVITGTIKTIDELATKTKQGNLF
HHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEE
KVTAKLTLSEKESTTIQYGQQGRVISVIAKKTFFDFYKDKLFKVTE
EEEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883181; 11463916; 1987129; 8407811 [H]