| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
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The map label for this gene is yfdH [C]
Identifier: 195978518
GI number: 195978518
Start: 1453264
End: 1454196
Strand: Direct
Name: yfdH [C]
Synonym: Sez_1415
Alternate gene names: 195978518
Gene position: 1453264-1454196 (Clockwise)
Preceding gene: 195978517
Following gene: 195978524
Centisome position: 71.8
GC content: 42.87
Gene sequence:
>933_bases ATGCCTATGACATTATTATCTGTAATTATCCCCTGCTTCAACGAAGAAGACACGATTATTCCTTATCTTGAAGAGATGAA GCAGATTGAAACGGCCATGACCAGCCAATTAGCCTTTGAATATCTTTTTATTGATGATGGCTCTACAGATCAAACCCTGA GCGTGCTAAGAGAGCTTGCGGGGCGCTTCTCTAATGTGCATTACCTCTCCTTTTCACGACATTTTGGCAAGGAAGCTGGA CTATTAGCCGGCCTAGAAGAGGCAAAAGGAAGCTATATTACGGTGATGGACGTTGACCTTCAAGACCCACCAGAGCTGCT CCCTCTAATGTATAGCAAACTACAAGAAGGCTTTGACGTGGTGGCCACAAAAAGACAAAGCCGACAGGGAGAGCCTGCTA TCCGATCCTTTTTTGCTAGGCTTTTTTACAAGCTGGTCAAGCATGTCTCTAACACAGAAATCGTCGATGGGGTACGTGAT TATCGTTTAATGACAAGACAGGTGGTGGATAGCATTTTAGAGCTGGGAGAGGTCAACCGCTTTTCCAAGGGGATTTTTTC TTGGGTTGGCTACAATACTGCCTATATCAGCTTTGACAATCGTAAGCGGCAGTACGGCAAAACCAGCTGGAACTTTCTTG AGCTTTTGAACTACTCGATAGACGGTTTTATCAATTTTTCTGAGATGCCTTTAACCATTGCTACCTGGACTGGAACGCTT AGCTTTTTGCTATCCCTACTGGCCATTTGCTTTATTGTGATACGCAAATTGCTTTTTGGTGATCCAGTTTCAGGCTGGGC AAGCACTGTATCCATTATGCTGTTTATTGGCGGTATTCAACTATTTTGTATGGGCATTATTGGAAAATACATCTCCAAAA TCTTTCTTGAAACCAAGAAAAGACCCGTCTACATCGTCAAAGAAAAGAAATAA
Upstream 100 bases:
>100_bases TGACTATTATCCCCAACAGTGACCAGCAGCAGGCTATTGGCTTTTCTTTTTCATAACTGGTGAATTATGGTACAATGTGT CAAAAGACCTATGGAAAGTG
Downstream 100 bases:
>100_bases CAGAGCAATCATCAAAGCTCCTATCAGCCACCAATGAGGCCGATAAGGACTGGTTGCCCTCATCATGACAAGCACGACAA AAAGACTTGATGGTCTCAAT
Product: bactoprenol glucosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPMTLLSVIIPCFNEEDTIIPYLEEMKQIETAMTSQLAFEYLFIDDGSTDQTLSVLRELAGRFSNVHYLSFSRHFGKEAG LLAGLEEAKGSYITVMDVDLQDPPELLPLMYSKLQEGFDVVATKRQSRQGEPAIRSFFARLFYKLVKHVSNTEIVDGVRD YRLMTRQVVDSILELGEVNRFSKGIFSWVGYNTAYISFDNRKRQYGKTSWNFLELLNYSIDGFINFSEMPLTIATWTGTL SFLLSLLAICFIVIRKLLFGDPVSGWASTVSIMLFIGGIQLFCMGIIGKYISKIFLETKKRPVYIVKEKK
Sequences:
>Translated_310_residues MPMTLLSVIIPCFNEEDTIIPYLEEMKQIETAMTSQLAFEYLFIDDGSTDQTLSVLRELAGRFSNVHYLSFSRHFGKEAG LLAGLEEAKGSYITVMDVDLQDPPELLPLMYSKLQEGFDVVATKRQSRQGEPAIRSFFARLFYKLVKHVSNTEIVDGVRD YRLMTRQVVDSILELGEVNRFSKGIFSWVGYNTAYISFDNRKRQYGKTSWNFLELLNYSIDGFINFSEMPLTIATWTGTL SFLLSLLAICFIVIRKLLFGDPVSGWASTVSIMLFIGGIQLFCMGIIGKYISKIFLETKKRPVYIVKEKK >Mature_309_residues PMTLLSVIIPCFNEEDTIIPYLEEMKQIETAMTSQLAFEYLFIDDGSTDQTLSVLRELAGRFSNVHYLSFSRHFGKEAGL LAGLEEAKGSYITVMDVDLQDPPELLPLMYSKLQEGFDVVATKRQSRQGEPAIRSFFARLFYKLVKHVSNTEIVDGVRDY RLMTRQVVDSILELGEVNRFSKGIFSWVGYNTAYISFDNRKRQYGKTSWNFLELLNYSIDGFINFSEMPLTIATWTGTLS FLLSLLAICFIVIRKLLFGDPVSGWASTVSIMLFIGGIQLFCMGIIGKYISKIFLETKKRPVYIVKEKK
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=39.0163934426229, Blast_Score=225, Evalue=3e-60, Organism=Escherichia coli, GI1788588, Length=316, Percent_Identity=29.4303797468354, Blast_Score=150, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6325441, Length=120, Percent_Identity=31.6666666666667, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 35396; Mature: 35264
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTLLSVIIPCFNEEDTIIPYLEEMKQIETAMTSQLAFEYLFIDDGSTDQTLSVLRELA CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH GRFSNVHYLSFSRHFGKEAGLLAGLEEAKGSYITVMDVDLQDPPELLPLMYSKLQEGFDV HHHCCEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHH VATKRQSRQGEPAIRSFFARLFYKLVKHVSNTEIVDGVRDYRLMTRQVVDSILELGEVNR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKGIFSWVGYNTAYISFDNRKRQYGKTSWNFLELLNYSIDGFINFSEMPLTIATWTGTL HHHHHHHHHCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHH SFLLSLLAICFIVIRKLLFGDPVSGWASTVSIMLFIGGIQLFCMGIIGKYISKIFLETKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVYIVKEKK CCEEEEECCC >Mature Secondary Structure PMTLLSVIIPCFNEEDTIIPYLEEMKQIETAMTSQLAFEYLFIDDGSTDQTLSVLRELA CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH GRFSNVHYLSFSRHFGKEAGLLAGLEEAKGSYITVMDVDLQDPPELLPLMYSKLQEGFDV HHHCCEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHH VATKRQSRQGEPAIRSFFARLFYKLVKHVSNTEIVDGVRDYRLMTRQVVDSILELGEVNR HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKGIFSWVGYNTAYISFDNRKRQYGKTSWNFLELLNYSIDGFINFSEMPLTIATWTGTL HHHHHHHHHCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHH SFLLSLLAICFIVIRKLLFGDPVSGWASTVSIMLFIGGIQLFCMGIIGKYISKIFLETKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVYIVKEKK CCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]