Definition Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome.
Accession NC_011134
Length 2,024,171

Click here to switch to the map view.

The map label for this gene is 195977974

Identifier: 195977974

GI number: 195977974

Start: 889636

End: 890826

Strand: Direct

Name: 195977974

Synonym: Sez_0846

Alternate gene names: NA

Gene position: 889636-890826 (Clockwise)

Preceding gene: 195977973

Following gene: 195977975

Centisome position: 43.95

GC content: 39.29

Gene sequence:

>1191_bases
GTGTTGGGAACCAGCTCGACAGCACTAATATCAGTGATTTTACTGATGATTGTGTCTCGGGTCTTATCTAAATCAGCTTC
AGATACCTTTAGCTTTGCCTATGCTATTGGAAATCAGCTGATTACTATTGGCTTATTTCAGATTAGAAATTTCCAATCAA
CGGATATATTACACAAGTACCGCTTCAAAGACTATTTTTATACAAGACTAGTCACCTGTTTCTTGATGATAGCCATTTCA
GTGCTCTATATTTATTTGGGGAGCTATAGTGGGTTTAAGGGGCTAGTGATTTGGTTGATTTGCTTGTATCGTTGCACAGA
TGCCATTTCTGATGTGTTTCAAGGAATGTTTCAACAAAGAGAGCGCTTAGATATTGCCGGCAAATCCTTGTTTTATCGAA
ATATGCTGGTGATTCTTGGCTTTACGCTCTGTCTGGTTCTGACCAAGCAGCTAGTCCTGTCTTTGATCGTGATATGTCTT
ATTTCAGTGGCTTGTATTGTGCTATTTGACATAACCCCTTCAGTTTCCTTTACGAGCCTTGAGCGTCGTATTGATGCTCA
AAGCATCTTAGGGCTATTGAAGGAGAGCTTTCCCCTCTTTTTAAATGGTTTTTTACTCATTTATATCTACAACCAGCCCA
AGTTTGTTTTGGAGCAGCTTTACTCAAAGCAGCTGATCCCAGCCGGTGTTCAAACAGAATTTAATATTTTGTTTATGCCT
ATTTTTATGATTAACCTGATTTTCTTGTTTTTAAGGCCTATGATCACTCAGCTGGCCATTTACCATTCAAAAGAGGACAA
GAAGAGCTTTGCACAATTAGAGCGTCGTCTCAGTCTAGTGCTGCTATTAGCAAGCCTAGCTATCTTGCTTGCTAGCTATT
TTGTGGGGCTGCCGGTGCTATCGCTTGTTTATGGTATTGATTTAAGGCATTACCAGCTTGATTTTATGCTTCTTATTTTT
GGAGGGATTATCAGCACCTTTGCCACTTATATTGATAATTTGATTACCATTATCAGAAAGCAGCACTTGCTTGTGATACC
TTATGTTGTGTCCTTTATCTCCTCACTAGCCATCACTGGTTCTTTGGCTAGAAGCTTTGGGGTGATTGGAGTTACCTATG
GTTTTGTGATCTCAATGCTGATTTGGCTGCTATTGTCATATGGCTTGTACATTATGGAAAAAAGGAAATAG

Upstream 100 bases:

>100_bases
AAAATGATTCAGTATTTAGCCCTTAATGAGAAGGAAAAGCAGGAAGAAGATGAAAACCAGCAGTAGGATTCAATCGGATC
AGTCGATTTTTATTTGGAAT

Downstream 100 bases:

>100_bases
GATATGTTAGATACCTTATTTGACAAATTGAAAAGGGCTAGTAAAGCTTTGCTTGTTTTGCTTGGTGCCTTTCTTGTTTT
GCTGCTTTTATATACGCAAT

Product: heteropolysaccharide repeat unit export protein

Products: NA

Alternate protein names: Exopolysaccharide Biosynthesis Protein; Transcriptional Activator; Polysaccharide Biosynthesis Protein Transporter; Polysaccharides Export Protein; Polysaccharide/Teichoic Acid Transporter

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLGTSSTALISVILLMIVSRVLSKSASDTFSFAYAIGNQLITIGLFQIRNFQSTDILHKYRFKDYFYTRLVTCFLMIAIS
VLYIYLGSYSGFKGLVIWLICLYRCTDAISDVFQGMFQQRERLDIAGKSLFYRNMLVILGFTLCLVLTKQLVLSLIVICL
ISVACIVLFDITPSVSFTSLERRIDAQSILGLLKESFPLFLNGFLLIYIYNQPKFVLEQLYSKQLIPAGVQTEFNILFMP
IFMINLIFLFLRPMITQLAIYHSKEDKKSFAQLERRLSLVLLLASLAILLASYFVGLPVLSLVYGIDLRHYQLDFMLLIF
GGIISTFATYIDNLITIIRKQHLLVIPYVVSFISSLAITGSLARSFGVIGVTYGFVISMLIWLLLSYGLYIMEKRK

Sequences:

>Translated_396_residues
MLGTSSTALISVILLMIVSRVLSKSASDTFSFAYAIGNQLITIGLFQIRNFQSTDILHKYRFKDYFYTRLVTCFLMIAIS
VLYIYLGSYSGFKGLVIWLICLYRCTDAISDVFQGMFQQRERLDIAGKSLFYRNMLVILGFTLCLVLTKQLVLSLIVICL
ISVACIVLFDITPSVSFTSLERRIDAQSILGLLKESFPLFLNGFLLIYIYNQPKFVLEQLYSKQLIPAGVQTEFNILFMP
IFMINLIFLFLRPMITQLAIYHSKEDKKSFAQLERRLSLVLLLASLAILLASYFVGLPVLSLVYGIDLRHYQLDFMLLIF
GGIISTFATYIDNLITIIRKQHLLVIPYVVSFISSLAITGSLARSFGVIGVTYGFVISMLIWLLLSYGLYIMEKRK
>Mature_396_residues
MLGTSSTALISVILLMIVSRVLSKSASDTFSFAYAIGNQLITIGLFQIRNFQSTDILHKYRFKDYFYTRLVTCFLMIAIS
VLYIYLGSYSGFKGLVIWLICLYRCTDAISDVFQGMFQQRERLDIAGKSLFYRNMLVILGFTLCLVLTKQLVLSLIVICL
ISVACIVLFDITPSVSFTSLERRIDAQSILGLLKESFPLFLNGFLLIYIYNQPKFVLEQLYSKQLIPAGVQTEFNILFMP
IFMINLIFLFLRPMITQLAIYHSKEDKKSFAQLERRLSLVLLLASLAILLASYFVGLPVLSLVYGIDLRHYQLDFMLLIF
GGIISTFATYIDNLITIIRKQHLLVIPYVVSFISSLAITGSLARSFGVIGVTYGFVISMLIWLLLSYGLYIMEKRK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45073; Mature: 45073

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTSSTALISVILLMIVSRVLSKSASDTFSFAYAIGNQLITIGLFQIRNFQSTDILHKY
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFKDYFYTRLVTCFLMIAISVLYIYLGSYSGFKGLVIWLICLYRCTDAISDVFQGMFQQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLDIAGKSLFYRNMLVILGFTLCLVLTKQLVLSLIVICLISVACIVLFDITPSVSFTSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERRIDAQSILGLLKESFPLFLNGFLLIYIYNQPKFVLEQLYSKQLIPAGVQTEFNILFMP
HHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
IFMINLIFLFLRPMITQLAIYHSKEDKKSFAQLERRLSLVLLLASLAILLASYFVGLPVL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVYGIDLRHYQLDFMLLIFGGIISTFATYIDNLITIIRKQHLLVIPYVVSFISSLAITG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SLARSFGVIGVTYGFVISMLIWLLLSYGLYIMEKRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MLGTSSTALISVILLMIVSRVLSKSASDTFSFAYAIGNQLITIGLFQIRNFQSTDILHKY
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFKDYFYTRLVTCFLMIAISVLYIYLGSYSGFKGLVIWLICLYRCTDAISDVFQGMFQQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLDIAGKSLFYRNMLVILGFTLCLVLTKQLVLSLIVICLISVACIVLFDITPSVSFTSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ERRIDAQSILGLLKESFPLFLNGFLLIYIYNQPKFVLEQLYSKQLIPAGVQTEFNILFMP
HHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
IFMINLIFLFLRPMITQLAIYHSKEDKKSFAQLERRLSLVLLLASLAILLASYFVGLPVL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVYGIDLRHYQLDFMLLIFGGIISTFATYIDNLITIIRKQHLLVIPYVVSFISSLAITG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SLARSFGVIGVTYGFVISMLIWLLLSYGLYIMEKRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA