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The map label for this gene is yibD [C]

Identifier: 195977970

GI number: 195977970

Start: 885772

End: 886779

Strand: Direct

Name: yibD [C]

Synonym: Sez_0842

Alternate gene names: 195977970

Gene position: 885772-886779 (Clockwise)

Preceding gene: 195977969

Following gene: 195977971

Centisome position: 43.76

GC content: 43.35

Gene sequence:

>1008_bases
ATGAAAAAAGTTTCCATTATTTGCACCAATTATAATAAGGGGCCTTGGATCGCAGAGGCCTTAGACAGCTTTTTAGCCCA
ACAGACAACCTTTGACGTTGAGATTATTGTCATTGATGACGCTTCAACAGACCATTCCAGACAGATCCTCATGGACTATC
AAGCGAGCTTTCCAGATCGCATACGGCTCATCGTTAATGAGGTAAATCTTGGGATTGCAAGAACCTGGGTCAAGGCTTGT
TTGGAGGCAAAGGGACAGTATATTGCCAGATGTGATGGTGATGACTATTGGACTGATACTCTCAAGCTACAAAAGCAGGT
TGATTTGCTGGATAGCTCACCGGATTCAAAATGGTCTAATACTGACTTTGATTTTGTAGATACTGATGGTAAGCTTATTC
AGGGCAATGCCTTTGAAAGTGGCTTTACTCCCTTAACAGACACCTACGAGAAAATGCTTGCTTTAAAAGGAATGACCATG
TCATCAACTTGGCTGGTGGAGGCTGATCTGATGAGGGCTGTTAATCAACGCATTGATTTGGAGACGTCAGATGACACTTT
TGACATACAGCTGGAGCTGTTTCAGTCAACCTCACTAGCCTATTTGAAGGATTCGACTACTGTTTATCGACTGACGGGTA
ATTCAGATTCAAGGCCGGCAGCTGAGGAAAAGATGCTGGGCCGTATTCAAGGCCTGTTGGAGACCCAGCTGTCCTATTTG
TCCAAATACCCTACAGCCAATATGGAAGCTATTACCAAAGCATTACTAAAGCAGGACGCTAAAAATGAAATTCGGATTCA
TCAATTAAGTCATACCATTCATGAATTACGACAGACGCTTGCAGATCAGGAGGCTTTACAGGCAGAGAAGATAGATCAGC
TACAGCAGCAGCTTGATCATCAAAGGCAAGAGGTTGAAGCGCTAACCCATCAATACAATTGTGTGGTTACCTCACGTCGT
TGGAGGTACCTATCAAAGCTGCTTGAGCTTTTTAGGAGGAAAAAATGA

Upstream 100 bases:

>100_bases
TTGCTCCAGATGACCTGTCTGCTTTGGACTCAGCCAGCGGCTTATATCAAAGAAATGGCAGCTGGCTCATTAATCAATAA
TCGTCATTAGAAAGCATCAT

Downstream 100 bases:

>100_bases
AGCGTATTTTATTGTATGTGCATTTCAATAAATATCATAAGGTAAGCGATCATGTTTATTACCAGCTCGAACAGATGAGA
GCCTTGTTTTCAAAGATTGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDRIRLIVNEVNLGIARTWVKAC
LEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSNTDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTM
SSTWLVEADLMRAVNQRIDLETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYL
SKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDHQRQEVEALTHQYNCVVTSRR
WRYLSKLLELFRRKK

Sequences:

>Translated_335_residues
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDRIRLIVNEVNLGIARTWVKAC
LEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSNTDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTM
SSTWLVEADLMRAVNQRIDLETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYL
SKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDHQRQEVEALTHQYNCVVTSRR
WRYLSKLLELFRRKK
>Mature_335_residues
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDRIRLIVNEVNLGIARTWVKAC
LEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSNTDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTM
SSTWLVEADLMRAVNQRIDLETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYL
SKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDHQRQEVEALTHQYNCVVTSRR
WRYLSKLLELFRRKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38510; Mature: 38510

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDR
CCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHH
IRLIVNEVNLGIARTWVKACLEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSN
HHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTMSSTWLVEADLMRAVNQRIDL
CCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCC
ETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYL
CCCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDH
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQEVEALTHQYNCVVTSRRWRYLSKLLELFRRKK
HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDR
CCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHH
IRLIVNEVNLGIARTWVKACLEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSN
HHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTMSSTWLVEADLMRAVNQRIDL
CCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCC
ETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYL
CCCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDH
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQEVEALTHQYNCVVTSRRWRYLSKLLELFRRKK
HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]