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The map label for this gene is srtC.1

Identifier: 195977942

GI number: 195977942

Start: 848453

End: 849262

Strand: Direct

Name: srtC.1

Synonym: Sez_0813

Alternate gene names: NA

Gene position: 848453-849262 (Clockwise)

Preceding gene: 195977941

Following gene: 195977943

Centisome position: 41.92

GC content: 47.28

Gene sequence:

>810_bases
ATGAAGAAAAGTGTCATTTTTTGGAGTGTGATTTTGGTGGCAGGCTGTCTGATTGTCCTTTACCCCACCCTTAGTAACTA
TTGGAATGCACAGCACCAATCACAGCTCATCGCTGACTATATTTCAAGCACGCAAGCCTTGAGACATAAGGATAGTCAGC
TCATGCTAGAAGCAGCCAATCAGTACAATCAGCAGCTAAAAGCTAACCATGATCCTGATTTAACCTTGACCGATAGTGAG
ACAGAAGCCTATCAGCAGCAGCTGGATCTGACAAATACAGGTATCATGGCCTACATAGATATTCCAAAGGTGCATGAGCG
GCTGCCGATTTATCATGGCACCGATGAGGAGATCCTACAGGTGGCTATCGGTCATCTTGCAGGCACCTCTTTGCCTGTAG
GTGGCAAGGGAACACATGCTGTCATCTCAGGACATCGAGGGTTACCCTCTGCCAAGCTATTTACCAATATTGATAAGCTG
AGGATTAACGATACCTTTACCATCACCAGTCTTAATAGGACTATGACCTATCAGGTGGATAAGATTGCTACCGTTTTGCC
TGATGATGTCAGCCTCTTAAGGATAGAGGAAGGGAAGGATCTGGTAACCTTGGTCACCTGTACCCCCTACGGTGTCAACA
CGCATCGGCTCTTGGTCAGAGGGCATCGTATCAAAACAGCGACACCAGCCGCTGCAAGAGGATCTCAAAAGCCTAGTAGG
CTAATCCTCTGGCTCTTGCTAATCAGTGCATTAGGGCTATCTCTCGTACTAATAGGCACTTGGCGCTGGCGTAGGAGGTC
TAAAGCATGA

Upstream 100 bases:

>100_bases
TTCGTCAGAAACAGCAATAAGATCGTGTGAGTAGGTAAAAAGAAGTGGATAGACGTCTTACCAAGACCTATTCACCTCTT
TTTTTGATAGAGGCTATAGA

Downstream 100 bases:

>100_bases
GCAGGCTTTCCAGAAGCAACTAAGTCAAATCATCAACCCTTGATAGGTTACTGAGGACCTATCAGGGGCTTTTTTAGTGC
TAAATTGCGACTATGATTAA

Product: sortase C family protein

Products: NA

Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Ortase Yhcs B.Subtilis Ortholog; Fimbrial Associated Sortase Family Protein; Sortase C Type; Lpxtg-Site Transpeptidase Family Protein; Sortase C; SortaseC

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAANQYNQQLKANHDPDLTLTDSE
TEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQVAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKL
RINDTFTITSLNRTMTYQVDKIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSR
LILWLLLISALGLSLVLIGTWRWRRRSKA

Sequences:

>Translated_269_residues
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAANQYNQQLKANHDPDLTLTDSE
TEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQVAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKL
RINDTFTITSLNRTMTYQVDKIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSR
LILWLLLISALGLSLVLIGTWRWRRRSKA
>Mature_269_residues
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAANQYNQQLKANHDPDLTLTDSE
TEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQVAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKL
RINDTFTITSLNRTMTYQVDKIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSR
LILWLLLISALGLSLVLIGTWRWRRRSKA

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29999; Mature: 29999

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QYNQQLKANHDPDLTLTDSETEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQ
HHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHH
VAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKLRINDTFTITSLNRTMTYQVD
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCHHHEEECCEEEEEECCCEEEEEHH
KIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSR
HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCEEECCCCHHHCCCCCHHH
LILWLLLISALGLSLVLIGTWRWRRRSKA
HHHHHHHHHHHHHHEEEEECCHHHHCCCC
>Mature Secondary Structure
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QYNQQLKANHDPDLTLTDSETEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQ
HHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHH
VAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKLRINDTFTITSLNRTMTYQVD
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCHHHEEECCEEEEEECCCEEEEEHH
KIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSR
HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCEEECCCCHHHCCCCCHHH
LILWLLLISALGLSLVLIGTWRWRRRSKA
HHHHHHHHHHHHHHEEEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA