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The map label for this gene is whiA

Identifier: 195977864

GI number: 195977864

Start: 764485

End: 765396

Strand: Direct

Name: whiA

Synonym: Sez_0732

Alternate gene names: 195977864

Gene position: 764485-765396 (Clockwise)

Preceding gene: 195977863

Following gene: 195977865

Centisome position: 37.77

GC content: 42.43

Gene sequence:

>912_bases
ATGAGTTTTACGACAACTGTTAAAGAAGAATTGATTCATTTATCTGCTTCTGATCAAACAGAATTATCAGCAATCATCAA
GCTGGCTGGTAGCCTAGGCTTGGCTAATCAGAGCTTGAATTTGTCTATCACAACTGAAAACGCTAAGATTGCTCGCTACA
TCTATGCGCTTATCGAAGACACCTATCATATCATTCCAGAAATCAAGTACCATCAAAAGACCAACTTGAAAAAAAATCGT
GTCTATACGGTTTATTTGGATAAGCAGGTGGATAAGCTCTTAGCAGATTTAAAGCTGGCAGATTCTTTTTTTGGCATTGA
GACAGGTATTGAGCAGCAGGTCATGTCAGATGATGATGCTGGTCGTGCCTATCTCAAGGGTGCTTTTTTAGCGGCAGGGA
CTGTAAGGGATCCAGAATCTGGCAAGTATCAGCTAGAGATCTACTCTGTCTATCTAGACCATGCTCAGGATTTGGCCCAG
CTCATGCACAAATTCATGCTAGATGCCAAGGTTATCGAGAGAAAAAATGGTGCAGTAACCTATTTGCAAAAGGCTGAGGA
CATCATGGATTTTCTCATTATTATTGGTGCCATGTCGTGTAAGGAGGAGTTTGAGGCTGTTAAGCTTTTGCGTGAGGCGA
GAAATGACATCAATCGGGCCAATAATGCAGAGACTGCTAATATTGCTAAAACCATCACCGCCAGCATGAGAACTATCAAT
AATATTATCAAAATCATGGATACGATTGGCTTGGACAGCCTGCCAGTTGAGCTGCAGCAGATTGCCCAGATGAGAGTAGC
CAACCCAGACTATTCTCTTCAACAAATCGCAGATTCGCTTGACTTTGCCATCACTAAGAGCGGGGTCAACCATCGCCTGC
GAAAAATCAATAAACTGGCGGAGGACTTATAA

Upstream 100 bases:

>100_bases
TCATCTCGTCTAATTTTCTGCGTTTGGAGAATGGCGGAGCCTTTCATGACGGGCACTTGGTCGTGGAAGAATTAATGAAC
CTAGTTAGGATAACCAAGCT

Downstream 100 bases:

>100_bases
AGACAGCTTAGCCTTTTTCAGGCTGATAAAAAAGGGGGTAAGGTGATACGAACAAGCCGCCTTTTAAGAGATGTCTTGTC
AAGCTTTTTATAGGCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSFTTTVKEELIHLSASDQTELSAIIKLAGSLGLANQSLNLSITTENAKIARYIYALIEDTYHIIPEIKYHQKTNLKKNR
VYTVYLDKQVDKLLADLKLADSFFGIETGIEQQVMSDDDAGRAYLKGAFLAAGTVRDPESGKYQLEIYSVYLDHAQDLAQ
LMHKFMLDAKVIERKNGAVTYLQKAEDIMDFLIIIGAMSCKEEFEAVKLLREARNDINRANNAETANIAKTITASMRTIN
NIIKIMDTIGLDSLPVELQQIAQMRVANPDYSLQQIADSLDFAITKSGVNHRLRKINKLAEDL

Sequences:

>Translated_303_residues
MSFTTTVKEELIHLSASDQTELSAIIKLAGSLGLANQSLNLSITTENAKIARYIYALIEDTYHIIPEIKYHQKTNLKKNR
VYTVYLDKQVDKLLADLKLADSFFGIETGIEQQVMSDDDAGRAYLKGAFLAAGTVRDPESGKYQLEIYSVYLDHAQDLAQ
LMHKFMLDAKVIERKNGAVTYLQKAEDIMDFLIIIGAMSCKEEFEAVKLLREARNDINRANNAETANIAKTITASMRTIN
NIIKIMDTIGLDSLPVELQQIAQMRVANPDYSLQQIADSLDFAITKSGVNHRLRKINKLAEDL
>Mature_302_residues
SFTTTVKEELIHLSASDQTELSAIIKLAGSLGLANQSLNLSITTENAKIARYIYALIEDTYHIIPEIKYHQKTNLKKNRV
YTVYLDKQVDKLLADLKLADSFFGIETGIEQQVMSDDDAGRAYLKGAFLAAGTVRDPESGKYQLEIYSVYLDHAQDLAQL
MHKFMLDAKVIERKNGAVTYLQKAEDIMDFLIIIGAMSCKEEFEAVKLLREARNDINRANNAETANIAKTITASMRTINN
IIKIMDTIGLDSLPVELQQIAQMRVANPDYSLQQIADSLDFAITKSGVNHRLRKINKLAEDL

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_STREM (B4U278)

Other databases:

- EMBL:   CP001129
- RefSeq:   YP_002123108.1
- EnsemblBacteria:   EBSTRT00000008545
- GeneID:   6761561
- GenomeReviews:   CP001129_GR
- KEGG:   sez:Sez_0732
- GeneTree:   EBGT00050000028037
- HOGENOM:   HBG485718
- OMA:   DSFFGIE
- ProtClustDB:   CLSK877081
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 33994; Mature: 33863

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTTTVKEELIHLSASDQTELSAIIKLAGSLGLANQSLNLSITTENAKIARYIYALIED
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHH
TYHIIPEIKYHQKTNLKKNRVYTVYLDKQVDKLLADLKLADSFFGIETGIEQQVMSDDDA
HHHHCCCCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC
GRAYLKGAFLAAGTVRDPESGKYQLEIYSVYLDHAQDLAQLMHKFMLDAKVIERKNGAVT
CHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YLQKAEDIMDFLIIIGAMSCKEEFEAVKLLREARNDINRANNAETANIAKTITASMRTIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NIIKIMDTIGLDSLPVELQQIAQMRVANPDYSLQQIADSLDFAITKSGVNHRLRKINKLA
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDL
HCC
>Mature Secondary Structure 
SFTTTVKEELIHLSASDQTELSAIIKLAGSLGLANQSLNLSITTENAKIARYIYALIED
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHH
TYHIIPEIKYHQKTNLKKNRVYTVYLDKQVDKLLADLKLADSFFGIETGIEQQVMSDDDA
HHHHCCCCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC
GRAYLKGAFLAAGTVRDPESGKYQLEIYSVYLDHAQDLAQLMHKFMLDAKVIERKNGAVT
CHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YLQKAEDIMDFLIIIGAMSCKEEFEAVKLLREARNDINRANNAETANIAKTITASMRTIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NIIKIMDTIGLDSLPVELQQIAQMRVANPDYSLQQIADSLDFAITKSGVNHRLRKINKLA
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA