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The map label for this gene is ydeM [C]

Identifier: 195977849

GI number: 195977849

Start: 745878

End: 747173

Strand: Direct

Name: ydeM [C]

Synonym: Sez_0717

Alternate gene names: 195977849

Gene position: 745878-747173 (Clockwise)

Preceding gene: 195977848

Following gene: 195977850

Centisome position: 36.85

GC content: 32.25

Gene sequence:

>1296_bases
ATGGAAATGTCACCTTATATCCTAAGTACAACTCTTTCTGATGGGAAGGTATATTACAATACAAAAAATAATCATTCGTT
TTTTATAACTAACGAATTATTAGATAAAATTAATTATGATGAGACAGCTAGAACGCAGTATCTCGATTACTTAGTATCGT
TGCAGTATCACCATGAGGAAAAAGAATTAGAAAGAACATTGGCTAAAATAAATGCAGCCGATGAGAAATTACTTGAATTT
ACAATTTTGACACATGGAGACTGTAATTTTAGATGTAAATATTGTTATGAGAAATTTGAAAATATTTCGATGACTATCGA
AGTTGAGGAAGCCATTGTAGAATTTGCAGAGAAATTATTGTCTGAAGGAAAGTTTGAGCGCTTTAGTGTTCAATGGTTTG
GTGGGGAACCTTTACTTGGATATAGGACAATCGTTCGATTATCTGAGAAATTTTTAGAATTATGCTCAAGATACGATATT
GGATATTTTTCTGGAATTACAACAAATGGATATTTGTTAACAAGGCGCAGGTTTCAAAATTTAATTGAAAATTGTAAAGT
TACTAGCTATCAAATAACAGTTGATGGGGAAAAAAAATTCCATGATAATCAACGACTCCTTAAAAATGGTGCAGGATCTT
ATGATAGAATTTTGTTAAATCTCAAAATGATGGCAAAGAGTTCACTACCATTTCAGTGCACTATTAGATTTAACATTTCA
AAAGAAAATGCTGAGTCAATGGAAGCTTTTCTAAGATCAGATGGCTTGCTATTTAAGGAAGATAGTAGATATAGTCTTGC
GTACCATAATATTGGTGACTGGGGGCAAGGAGAACGATCTGATGATTACTGTGTCGATATTCCAGATGATGATCTCAGCT
ATTATTTTTCCAAACAAGCGATTTCTTTGGGATATAATATAAGTTCCCCTAAAACGATGATGTTAAACAGTATAAATTGC
TATGCTAATCGTGAGTGTCATTATATGTTTAATGTAAAAGGAATAGTTCAAAGCTGCACAGTGGCTCTTTATCGTAAAGA
AAACATCTTTGGGAGCATATTAGCAGGAGATATTAACGAAAAGAAAAGGAAAGATTGGATAAAAGGTATTGAGTACGACA
GGTGTAGTCAGTGCCCATATGTGTTACTTTGTAAATCAGGATATTGTCCTTTGGTAAGGCTAAATCAAGAGAAAACATGG
GAAAGGCTGTGTCAGTTATATAAAGAACGGATACAGAAAGATTTTTCACTTTTTGTTCTTACTAAATCTTATAACGATAT
TCTTGATATAAATTAA

Upstream 100 bases:

>100_bases
AAAAAAATCATAGCAAGCAAGTAGCAAGTGCAGATATGGGAATAAAATTGATGATTGGTATCAGGATGATATACTAAGGA
CTGTTAAAGGAGGTTTCGTT

Downstream 100 bases:

>100_bases
ATTTTTATGGAGGAACCAACAATGATTGTAAAAGAGAATAAAAAGTACGACCCAACCTCAGCTTATACAGTTAAAAATAA
TGGAGTTTGTGGTAACGGAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Radical SAM Domain Protein; Arylsulfatase Regulator; Transcriptional Regulator; Radical Sam Domain Protein; Radical SAM Family Protein; Arylsulfatase Regulator Fe-S Oxidoreductase; AstB/ChuR-Related Protein; Heme Biosynthesis Related Protein; Arylsulfatase Regulatory Protein; Arylsulfatase-Activating AtsB; Radical SAM Superfamily Protein; Radical SAM

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MEMSPYILSTTLSDGKVYYNTKNNHSFFITNELLDKINYDETARTQYLDYLVSLQYHHEEKELERTLAKINAADEKLLEF
TILTHGDCNFRCKYCYEKFENISMTIEVEEAIVEFAEKLLSEGKFERFSVQWFGGEPLLGYRTIVRLSEKFLELCSRYDI
GYFSGITTNGYLLTRRRFQNLIENCKVTSYQITVDGEKKFHDNQRLLKNGAGSYDRILLNLKMMAKSSLPFQCTIRFNIS
KENAESMEAFLRSDGLLFKEDSRYSLAYHNIGDWGQGERSDDYCVDIPDDDLSYYFSKQAISLGYNISSPKTMMLNSINC
YANRECHYMFNVKGIVQSCTVALYRKENIFGSILAGDINEKKRKDWIKGIEYDRCSQCPYVLLCKSGYCPLVRLNQEKTW
ERLCQLYKERIQKDFSLFVLTKSYNDILDIN

Sequences:

>Translated_431_residues
MEMSPYILSTTLSDGKVYYNTKNNHSFFITNELLDKINYDETARTQYLDYLVSLQYHHEEKELERTLAKINAADEKLLEF
TILTHGDCNFRCKYCYEKFENISMTIEVEEAIVEFAEKLLSEGKFERFSVQWFGGEPLLGYRTIVRLSEKFLELCSRYDI
GYFSGITTNGYLLTRRRFQNLIENCKVTSYQITVDGEKKFHDNQRLLKNGAGSYDRILLNLKMMAKSSLPFQCTIRFNIS
KENAESMEAFLRSDGLLFKEDSRYSLAYHNIGDWGQGERSDDYCVDIPDDDLSYYFSKQAISLGYNISSPKTMMLNSINC
YANRECHYMFNVKGIVQSCTVALYRKENIFGSILAGDINEKKRKDWIKGIEYDRCSQCPYVLLCKSGYCPLVRLNQEKTW
ERLCQLYKERIQKDFSLFVLTKSYNDILDIN
>Mature_431_residues
MEMSPYILSTTLSDGKVYYNTKNNHSFFITNELLDKINYDETARTQYLDYLVSLQYHHEEKELERTLAKINAADEKLLEF
TILTHGDCNFRCKYCYEKFENISMTIEVEEAIVEFAEKLLSEGKFERFSVQWFGGEPLLGYRTIVRLSEKFLELCSRYDI
GYFSGITTNGYLLTRRRFQNLIENCKVTSYQITVDGEKKFHDNQRLLKNGAGSYDRILLNLKMMAKSSLPFQCTIRFNIS
KENAESMEAFLRSDGLLFKEDSRYSLAYHNIGDWGQGERSDDYCVDIPDDDLSYYFSKQAISLGYNISSPKTMMLNSINC
YANRECHYMFNVKGIVQSCTVALYRKENIFGSILAGDINEKKRKDWIKGIEYDRCSQCPYVLLCKSGYCPLVRLNQEKTW
ERLCQLYKERIQKDFSLFVLTKSYNDILDIN

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50471; Mature: 50471

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSPYILSTTLSDGKVYYNTKNNHSFFITNELLDKINYDETARTQYLDYLVSLQYHHEE
CCCCCEEEEEEECCCEEEEECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
KELERTLAKINAADEKLLEFTILTHGDCNFRCKYCYEKFENISMTIEVEEAIVEFAEKLL
HHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEHHHHHHHCCCEEEEEHHHHHHHHHHHHH
SEGKFERFSVQWFGGEPLLGYRTIVRLSEKFLELCSRYDIGYFSGITTNGYLLTRRRFQN
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHH
LIENCKVTSYQITVDGEKKFHDNQRLLKNGAGSYDRILLNLKMMAKSSLPFQCTIRFNIS
HHHHCCEEEEEEEECCCHHHCCCHHHHHCCCCCHHHHEEEEEHHHCCCCCEEEEEEEEEC
KENAESMEAFLRSDGLLFKEDSRYSLAYHNIGDWGQGERSDDYCVDIPDDDLSYYFSKQA
CCCHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
ISLGYNISSPKTMMLNSINCYANRECHYMFNVKGIVQSCTVALYRKENIFGSILAGDINE
EEECCCCCCCCEEEEECCCEEECCCEEEEEEHHHHHHHHHHHEEECCCCCEEEEECCCCH
KKRKDWIKGIEYDRCSQCPYVLLCKSGYCPLVRLNQEKTWERLCQLYKERIQKDFSLFVL
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEE
TKSYNDILDIN
EECCCCEECCC
>Mature Secondary Structure
MEMSPYILSTTLSDGKVYYNTKNNHSFFITNELLDKINYDETARTQYLDYLVSLQYHHEE
CCCCCEEEEEEECCCEEEEECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
KELERTLAKINAADEKLLEFTILTHGDCNFRCKYCYEKFENISMTIEVEEAIVEFAEKLL
HHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEHHHHHHHCCCEEEEEHHHHHHHHHHHHH
SEGKFERFSVQWFGGEPLLGYRTIVRLSEKFLELCSRYDIGYFSGITTNGYLLTRRRFQN
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHH
LIENCKVTSYQITVDGEKKFHDNQRLLKNGAGSYDRILLNLKMMAKSSLPFQCTIRFNIS
HHHHCCEEEEEEEECCCHHHCCCHHHHHCCCCCHHHHEEEEEHHHCCCCCEEEEEEEEEC
KENAESMEAFLRSDGLLFKEDSRYSLAYHNIGDWGQGERSDDYCVDIPDDDLSYYFSKQA
CCCHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
ISLGYNISSPKTMMLNSINCYANRECHYMFNVKGIVQSCTVALYRKENIFGSILAGDINE
EEECCCCCCCCEEEEECCCEEECCCEEEEEEHHHHHHHHHHHEEECCCCCEEEEECCCCH
KKRKDWIKGIEYDRCSQCPYVLLCKSGYCPLVRLNQEKTWERLCQLYKERIQKDFSLFVL
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEE
TKSYNDILDIN
EECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA