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The map label for this gene is ynaJ [H]

Identifier: 195977818

GI number: 195977818

Start: 708850

End: 710394

Strand: Direct

Name: ynaJ [H]

Synonym: Sez_0684

Alternate gene names: 195977818

Gene position: 708850-710394 (Clockwise)

Preceding gene: 195977817

Following gene: 195977819

Centisome position: 35.02

GC content: 40.84

Gene sequence:

>1545_bases
ATGGAGAAAACAATTGACCAAAGGGTTGAAGAGGTTACCTATAACCGCGCTAAGGTTTGGCAGCTTGTTTTATTTGCTTT
GAACAATGCTTCAACCAATATCTACCTATTCACATTTATGTTTGTGACCTATTTTTCAACAGGTGTTCTAGGCTTGGCGG
CTATTTTTGTCAGCCAGATCATGGGTTATATTCGTATCTTTGATGGCTTTATTGATCCTGCGATTGGTATCTTGATTGAT
AAAACAGAAACTAAATTTGGTAAGTATCGTCCGATCCTAATCATAGGAAATATTATCACAGCCCTATCACTTATCCTGCT
GCTTGGTCTAAGTGGTGTTGATGAAGGAATTCGTTTCCCACTTTTTATCATGGTTTTGATTATTCATAAAATCGGCTACT
CTATGCAGCAAACCATCACTAAGGCTGGTCAGACAGCCCTTACTAATGATCCGAAGCAGCGTCCAATCTTTAATATTGTT
GATGCGATTATGACAACCCTGTTGATGACAGGCGGACAGTTTGTTGTATCCAGCTTCTTGGTTCCAACATTTGGCAACTT
CACACCAGCCTTCTTCCATGTTTTGATTTATGGCACTATTGTTATCTCAGCTATTTTGGGCCTATTGGCAGTGCTTGGTA
TTTGGAGCAAGGACAGAAAGGAATTCTTTGGTCTTGGTGAAAATACTCAAAAGACAGCTCTGAAGGACTATTTGAAGGTT
ATCAAGGGCAATCAGCCATTGCAGGTTTTATCAATTGCAGCAGCGTTGGTTAAGTTTGCTGTTCAATTCTTTGGTGATTC
GGTTGTCATGGTTATCTTGTTTGGTGTTTTATTTGGTAACTATGCCTTGTCTGGTCAATTCTCATTGCTGTTTATTGTTC
CGGGGATTTTGATTAATATTGCTTTTTCAGGCATTGCTCGTAAGAGAGGTTTGCGTTTCTCATATATCAGAGCTCTTCAG
ATTGGCTTGGTTGGCTTGTTAGCCTTTGGTATTGTGCTCTTTATGGGTAATAAGGGAGATCTCAGCTTAAGCCATATTAA
CCTTTACACTGTTTTGTTTACTGTGACACTGATTGTTGCTCGCTATGCCTCACAAGCGCCTGCTAGCTTGGTGCTAACAA
TGGGAGCTGATATTTCAGACTACGAAACATCAGAATCAGGCCGTTATGTATCAGGAATGATTGGTACAATCTTCTCCTTG
ACTGACTCGATTGCATCATCATTTGCGCCAATGGTTATTGGTGCAGTGCTGGCTGGTATTGGTTTTTCAAAGGCTTACCC
AACGATTGAGACACCGCTTACCCCAAGTCTAAAGATGGCCTTGATTGCGCTGCATGTCGGTATTCCATTTGTAGCCTTAC
TAGTGGCATTGATTTTGATGTCATTCTACAAGCTTGACAAAGAGGAAATGGTGCGTATTCAAGAGAAGATTCAAGTGATG
AAAGCAAGCTCTGATAAGGAACGCGTGCAGGCCATCGCTAAAAATGTACCACTGTCAGACATGGACTATGTCGATGTGAC
AAAATATCCTGTTGATAAGGATTAG

Upstream 100 bases:

>100_bases
GTTTAAATTGTGTTGACAAATCATCAGATGAATAGTAAGATAGGCATGTAGAAATAAAACGCTTACACTATAAGCGAATG
ATAAAAGGGGGATTTCTCTG

Downstream 100 bases:

>100_bases
GTGCTGGGTCAGCTATTTCTTTGAGGAGTGGCTGACTTTTTTGTAGAATATAACAGAGTAGCTTGATAGTACAAGGAGGA
GTGTTGTGAAAAAAGTTGTA

Product: glucuronide permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MEKTIDQRVEEVTYNRAKVWQLVLFALNNASTNIYLFTFMFVTYFSTGVLGLAAIFVSQIMGYIRIFDGFIDPAIGILID
KTETKFGKYRPILIIGNIITALSLILLLGLSGVDEGIRFPLFIMVLIIHKIGYSMQQTITKAGQTALTNDPKQRPIFNIV
DAIMTTLLMTGGQFVVSSFLVPTFGNFTPAFFHVLIYGTIVISAILGLLAVLGIWSKDRKEFFGLGENTQKTALKDYLKV
IKGNQPLQVLSIAAALVKFAVQFFGDSVVMVILFGVLFGNYALSGQFSLLFIVPGILINIAFSGIARKRGLRFSYIRALQ
IGLVGLLAFGIVLFMGNKGDLSLSHINLYTVLFTVTLIVARYASQAPASLVLTMGADISDYETSESGRYVSGMIGTIFSL
TDSIASSFAPMVIGAVLAGIGFSKAYPTIETPLTPSLKMALIALHVGIPFVALLVALILMSFYKLDKEEMVRIQEKIQVM
KASSDKERVQAIAKNVPLSDMDYVDVTKYPVDKD

Sequences:

>Translated_514_residues
MEKTIDQRVEEVTYNRAKVWQLVLFALNNASTNIYLFTFMFVTYFSTGVLGLAAIFVSQIMGYIRIFDGFIDPAIGILID
KTETKFGKYRPILIIGNIITALSLILLLGLSGVDEGIRFPLFIMVLIIHKIGYSMQQTITKAGQTALTNDPKQRPIFNIV
DAIMTTLLMTGGQFVVSSFLVPTFGNFTPAFFHVLIYGTIVISAILGLLAVLGIWSKDRKEFFGLGENTQKTALKDYLKV
IKGNQPLQVLSIAAALVKFAVQFFGDSVVMVILFGVLFGNYALSGQFSLLFIVPGILINIAFSGIARKRGLRFSYIRALQ
IGLVGLLAFGIVLFMGNKGDLSLSHINLYTVLFTVTLIVARYASQAPASLVLTMGADISDYETSESGRYVSGMIGTIFSL
TDSIASSFAPMVIGAVLAGIGFSKAYPTIETPLTPSLKMALIALHVGIPFVALLVALILMSFYKLDKEEMVRIQEKIQVM
KASSDKERVQAIAKNVPLSDMDYVDVTKYPVDKD
>Mature_514_residues
MEKTIDQRVEEVTYNRAKVWQLVLFALNNASTNIYLFTFMFVTYFSTGVLGLAAIFVSQIMGYIRIFDGFIDPAIGILID
KTETKFGKYRPILIIGNIITALSLILLLGLSGVDEGIRFPLFIMVLIIHKIGYSMQQTITKAGQTALTNDPKQRPIFNIV
DAIMTTLLMTGGQFVVSSFLVPTFGNFTPAFFHVLIYGTIVISAILGLLAVLGIWSKDRKEFFGLGENTQKTALKDYLKV
IKGNQPLQVLSIAAALVKFAVQFFGDSVVMVILFGVLFGNYALSGQFSLLFIVPGILINIAFSGIARKRGLRFSYIRALQ
IGLVGLLAFGIVLFMGNKGDLSLSHINLYTVLFTVTLIVARYASQAPASLVLTMGADISDYETSESGRYVSGMIGTIFSL
TDSIASSFAPMVIGAVLAGIGFSKAYPTIETPLTPSLKMALIALHVGIPFVALLVALILMSFYKLDKEEMVRIQEKIQVM
KASSDKERVQAIAKNVPLSDMDYVDVTKYPVDKD

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=462, Percent_Identity=21.8614718614719, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787902, Length=431, Percent_Identity=22.0417633410673, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790561, Length=471, Percent_Identity=22.5053078556263, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 56343; Mature: 56343

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTIDQRVEEVTYNRAKVWQLVLFALNNASTNIYLFTFMFVTYFSTGVLGLAAIFVSQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGYIRIFDGFIDPAIGILIDKTETKFGKYRPILIIGNIITALSLILLLGLSGVDEGIRFP
HHHHHHHHHHHCCHHHHEEECCHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHH
LFIMVLIIHKIGYSMQQTITKAGQTALTNDPKQRPIFNIVDAIMTTLLMTGGQFVVSSFL
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
VPTFGNFTPAFFHVLIYGTIVISAILGLLAVLGIWSKDRKEFFGLGENTQKTALKDYLKV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHH
IKGNQPLQVLSIAAALVKFAVQFFGDSVVMVILFGVLFGNYALSGQFSLLFIVPGILINI
HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFSGIARKRGLRFSYIRALQIGLVGLLAFGIVLFMGNKGDLSLSHINLYTVLFTVTLIVA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
RYASQAPASLVLTMGADISDYETSESGRYVSGMIGTIFSLTDSIASSFAPMVIGAVLAGI
HHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFSKAYPTIETPLTPSLKMALIALHVGIPFVALLVALILMSFYKLDKEEMVRIQEKIQVM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KASSDKERVQAIAKNVPLSDMDYVDVTKYPVDKD
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKTIDQRVEEVTYNRAKVWQLVLFALNNASTNIYLFTFMFVTYFSTGVLGLAAIFVSQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGYIRIFDGFIDPAIGILIDKTETKFGKYRPILIIGNIITALSLILLLGLSGVDEGIRFP
HHHHHHHHHHHCCHHHHEEECCHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHH
LFIMVLIIHKIGYSMQQTITKAGQTALTNDPKQRPIFNIVDAIMTTLLMTGGQFVVSSFL
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
VPTFGNFTPAFFHVLIYGTIVISAILGLLAVLGIWSKDRKEFFGLGENTQKTALKDYLKV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHH
IKGNQPLQVLSIAAALVKFAVQFFGDSVVMVILFGVLFGNYALSGQFSLLFIVPGILINI
HCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFSGIARKRGLRFSYIRALQIGLVGLLAFGIVLFMGNKGDLSLSHINLYTVLFTVTLIVA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
RYASQAPASLVLTMGADISDYETSESGRYVSGMIGTIFSLTDSIASSFAPMVIGAVLAGI
HHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFSKAYPTIETPLTPSLKMALIALHVGIPFVALLVALILMSFYKLDKEEMVRIQEKIQVM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KASSDKERVQAIAKNVPLSDMDYVDVTKYPVDKD
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]