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The map label for this gene is udk [H]

Identifier: 195977806

GI number: 195977806

Start: 696795

End: 697421

Strand: Direct

Name: udk [H]

Synonym: Sez_0672

Alternate gene names: 195977806

Gene position: 696795-697421 (Clockwise)

Preceding gene: 195977804

Following gene: 195977807

Centisome position: 34.42

GC content: 42.26

Gene sequence:

>627_bases
ATGCTTAAAAAACCCATTATTATTGGTGTGACTGGTGGTTCTGGTGGTGGTAAGACCAGCGTGTCTCGTGCCATTTTAAA
TAGCTTTCCAAATGCGAGAATTGCGATGATTCAGCATGATTCGTATTACAAGGATCAATCACATATCAGCTTTGAGGAAA
GGGTTAAGACTAATTATGATCATCCGTTAGCCTTTGATACGGATTTTATGATTCAGCAGCTAAAGGAGCTCTTGGCTGGC
CGACCTGTTGATATTCCAATCTATGATTACAAGGAGCATACTCGCAGCAACAGAACTTTTCGCCAAGAGCCTCAGGACGT
TATTATTGTTGAGGGGATTCTGGTATTAGAGGACGAGCGTTTGCGTGAGCTAATGGATATCAAGCTTTTTGTTGATACAG
ATGATGATATTCGGATTATCCGTCGTATCCAGCGTGATATGGTTGAGCGTGGCAGAAGCCTTGAGAGCATTATTGAGCAG
TACACAAGCGTTGTCAAGCCGATGTATCATCAATTTATTGAACCAAGTAAGCGCTATGCTGATATTGTCATTCCAGAAGG
GGTTAGCAATGTGGTTGCTATTGATCTCATCAACACAAAGATTGCCAGCATCTTAGGTGAGCTGTAG

Upstream 100 bases:

>100_bases
TCATATGTCTATCCTTTTATTTTGTTTTTCTCTTCATTATAGCATTATAGTGGCAAATTTGGTAAAATAGACCGAAAGAC
TTTTAGATTTGGAGTTTACA

Downstream 100 bases:

>100_bases
TGCTGTGATTGGAGACAGACAAATGCTACCAAGCCTAATCTTGCTTTTTGGTTGGAATGCTGTGGTCTTTGCGGCCTATG
GCAGTGATAAACACAGAGCC

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLKKPIIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAG
RPVDIPIYDYKEHTRSNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQ
YTSVVKPMYHQFIEPSKRYADIVIPEGVSNVVAIDLINTKIASILGEL

Sequences:

>Translated_208_residues
MLKKPIIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAG
RPVDIPIYDYKEHTRSNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQ
YTSVVKPMYHQFIEPSKRYADIVIPEGVSNVVAIDLINTKIASILGEL
>Mature_208_residues
MLKKPIIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAG
RPVDIPIYDYKEHTRSNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQ
YTSVVKPMYHQFIEPSKRYADIVIPEGVSNVVAIDLINTKIASILGEL

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI301129207, Length=207, Percent_Identity=44.4444444444444, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI57863312, Length=207, Percent_Identity=44.4444444444444, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI18699734, Length=214, Percent_Identity=40.6542056074766, Blast_Score=177, Evalue=4e-45,
Organism=Homo sapiens, GI13899253, Length=215, Percent_Identity=40.4651162790698, Blast_Score=171, Evalue=4e-43,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=34.8684210526316, Blast_Score=105, Evalue=2e-23,
Organism=Escherichia coli, GI87082034, Length=206, Percent_Identity=48.0582524271845, Blast_Score=209, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI17539894, Length=208, Percent_Identity=41.8269230769231, Blast_Score=175, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17539892, Length=208, Percent_Identity=41.8269230769231, Blast_Score=175, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71981181, Length=209, Percent_Identity=39.7129186602871, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6324339, Length=194, Percent_Identity=33.5051546391753, Blast_Score=115, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6320223, Length=193, Percent_Identity=26.4248704663212, Blast_Score=72, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649624, Length=218, Percent_Identity=39.4495412844037, Blast_Score=169, Evalue=1e-42,
Organism=Drosophila melanogaster, GI221458995, Length=217, Percent_Identity=39.1705069124424, Blast_Score=166, Evalue=8e-42,
Organism=Drosophila melanogaster, GI28573516, Length=196, Percent_Identity=39.7959183673469, Blast_Score=164, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28573514, Length=196, Percent_Identity=39.7959183673469, Blast_Score=164, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28573512, Length=196, Percent_Identity=39.7959183673469, Blast_Score=164, Evalue=3e-41,
Organism=Drosophila melanogaster, GI45550449, Length=196, Percent_Identity=39.7959183673469, Blast_Score=164, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 23906; Mature: 23906

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKPIIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYD
CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCC
HPLAFDTDFMIQQLKELLAGRPVDIPIYDYKEHTRSNRTFRQEPQDVIIVEGILVLEDER
CCCCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCHHCCCCCEEEEECEEEECHHH
LRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQYTSVVKPMYHQFIEPSKRYA
HHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHE
DIVIPEGVSNVVAIDLINTKIASILGEL
EEECCCCCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKPIIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYD
CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCC
HPLAFDTDFMIQQLKELLAGRPVDIPIYDYKEHTRSNRTFRQEPQDVIIVEGILVLEDER
CCCCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHCCCCCHHCCCCCEEEEECEEEECHHH
LRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQYTSVVKPMYHQFIEPSKRYA
HHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHE
DIVIPEGVSNVVAIDLINTKIASILGEL
EEECCCCCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186 [H]