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The map label for this gene is yvfS [H]

Identifier: 195977719

GI number: 195977719

Start: 607929

End: 608654

Strand: Direct

Name: yvfS [H]

Synonym: Sez_0581

Alternate gene names: 195977719

Gene position: 607929-608654 (Clockwise)

Preceding gene: 195977718

Following gene: 195977720

Centisome position: 30.03

GC content: 35.67

Gene sequence:

>726_bases
ATGAAAACCTTTAAAGCCTTATTAAAAATAGAATACCTTTTGATGCTTCGTTCTTTGTCAGTCCTATTTTTATCAATTGG
TATGCCAGTATTCTTTTTTCTCTTTTATTCTACTTTTGCTACTGAGTCTAAAAATATATTGAAAATCATGATGTTTAATA
TGTCGGCCTTTTCGAGTATCAGCTTTGCTCTGTTTGTTCTGCCATTTTCTTTACAAGAGGATCGGCGAAATAATCGTCTT
AATAGTTTGAGGTATTCTTCAGTGCCGCTTTGGCAATATTATACTGCTAAAATCATTAAAGTCATTTTTTATGATTTGCT
GTCCTGTTTGCTTGTTTTTAGCCTAGGACATTTTGTGAGAGGCATTACGATGTCAGCTCTTGATTGGGTGACAACTGGCC
TACTCCTAATGTTTGGTGCTTTAATGTTTATTAGCTTAGGCCTTCTTTTAGCCTATATTCAATCATCAGAAACGTTATCC
ATTCTTTCAAACATTCTCTATATTGGATTAGCTATTATGGGAGGCTTATGGATGCCAGTCAGCACCTTTCCGGAGTGGCT
GCAGGTTATTTCTAAAGTGACACCAACTTACCATTTTGCTAATTTGTTTTATCACTATCTTAGTCATGGTATAATAAGCT
TATCGTCTGTGGTTTATTTGATCAGTTTTTTCCTTGTCTGTCTGCTGGGAGTGTATCTGGTGGCTCAATTATTGGAGGCT
AAGTGA

Upstream 100 bases:

>100_bases
TTGGCAGCATTTGCAAAGAGCTAATTGCCCTATTGAAGTTATCGAGATGACAAACAGAACCTTGCTGGACCGTATTTTCA
TGACAACGAAAGGATAACAA

Downstream 100 bases:

>100_bases
TGTTTAACCCTTATCAAAAAAATGATCTTCTTTTTTATGTAGGACTGGTCTTTATGATCTTTCCCTTTTCAGGTGTCTTT
TTGTATAGTTACCCTAAGTG

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKTFKALLKIEYLLMLRSLSVLFLSIGMPVFFFLFYSTFATESKNILKIMMFNMSAFSSISFALFVLPFSLQEDRRNNRL
NSLRYSSVPLWQYYTAKIIKVIFYDLLSCLLVFSLGHFVRGITMSALDWVTTGLLLMFGALMFISLGLLLAYIQSSETLS
ILSNILYIGLAIMGGLWMPVSTFPEWLQVISKVTPTYHFANLFYHYLSHGIISLSSVVYLISFFLVCLLGVYLVAQLLEA
K

Sequences:

>Translated_241_residues
MKTFKALLKIEYLLMLRSLSVLFLSIGMPVFFFLFYSTFATESKNILKIMMFNMSAFSSISFALFVLPFSLQEDRRNNRL
NSLRYSSVPLWQYYTAKIIKVIFYDLLSCLLVFSLGHFVRGITMSALDWVTTGLLLMFGALMFISLGLLLAYIQSSETLS
ILSNILYIGLAIMGGLWMPVSTFPEWLQVISKVTPTYHFANLFYHYLSHGIISLSSVVYLISFFLVCLLGVYLVAQLLEA
K
>Mature_241_residues
MKTFKALLKIEYLLMLRSLSVLFLSIGMPVFFFLFYSTFATESKNILKIMMFNMSAFSSISFALFVLPFSLQEDRRNNRL
NSLRYSSVPLWQYYTAKIIKVIFYDLLSCLLVFSLGHFVRGITMSALDWVTTGLLLMFGALMFISLGLLLAYIQSSETLS
ILSNILYIGLAIMGGLWMPVSTFPEWLQVISKVTPTYHFANLFYHYLSHGIISLSSVVYLISFFLVCLLGVYLVAQLLEA
K

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27526; Mature: 27526

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKALLKIEYLLMLRSLSVLFLSIGMPVFFFLFYSTFATESKNILKIMMFNMSAFSSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SFALFVLPFSLQEDRRNNRLNSLRYSSVPLWQYYTAKIIKVIFYDLLSCLLVFSLGHFVR
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITMSALDWVTTGLLLMFGALMFISLGLLLAYIQSSETLSILSNILYIGLAIMGGLWMPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH
STFPEWLQVISKVTPTYHFANLFYHYLSHGIISLSSVVYLISFFLVCLLGVYLVAQLLEA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MKTFKALLKIEYLLMLRSLSVLFLSIGMPVFFFLFYSTFATESKNILKIMMFNMSAFSSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SFALFVLPFSLQEDRRNNRLNSLRYSSVPLWQYYTAKIIKVIFYDLLSCLLVFSLGHFVR
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITMSALDWVTTGLLLMFGALMFISLGLLLAYIQSSETLSILSNILYIGLAIMGGLWMPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH
STFPEWLQVISKVTPTYHFANLFYHYLSHGIISLSSVVYLISFFLVCLLGVYLVAQLLEA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]