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The map label for this gene is yesN [C]

Identifier: 195977699

GI number: 195977699

Start: 586832

End: 587668

Strand: Direct

Name: yesN [C]

Synonym: Sez_0561

Alternate gene names: 195977699

Gene position: 586832-587668 (Clockwise)

Preceding gene: 195977698

Following gene: 195977700

Centisome position: 28.99

GC content: 40.5

Gene sequence:

>837_bases
TTGGCTCAGGACTTGTCTCATTTAGCTCTTGTCGAGCCCTGTAAAGAGCTTGTATGGCTATTGTTACTAAGCTTTAGAAA
TAGTAGGAGAAATAGTGTGTACTCATTACTTATTGTTGAAGACGAATACCTTGTGCGTCAGGGTATTCGTTCTTTGGTTG
ATTTTGACCAATTTGCCATCGATCGTATAGCAGAGGCTGAGAATGGTCAGGTGGCTTGGGAGTTGTTCCAAGAAAATCCC
TATGACATTGTTTTAACAGATATTAATATGCCAAAGCTTAACGGCATTCAACTGGCAGAGCTCATCAAGACAAGGGCTCC
AAAGACTCATCTTGTCTTTTTAACAGGCTATGATGACTTCAATTATGCCCTATCTGCCTTAAAGCTGGGAGCTGATGACT
ACCTGCTAAAGCCATTTTCCAAATCAGATGTTGAAGAAATGCTCAAAAAGCTAAAGCAGAAATTAGAAAAGCTCAAAAAA
ACAGAAGCCCTTCAAAAATTAGTTGATAAGCCGCAGCAAGAAGGCTCAGAAATTAAGCTAGCTATCCAGGAGCGTTTAGC
AGATTCAAGCTTAACGCTAAAAAGCCTATCAAGTCAACTGGGCTTTAGCCCTAACTACCTAAGTGTTTTAATCAAAAAGG
ACCTAGGCTTGCCCTTTCAGGATTACCTGATTCAGGAGCGTCTCAAAAAGGCTAAGCTCTTATTATTAACAACGGATTTG
AGGGTCTATGAGATAGCAGAGCAGGTTGGCTTTGAGGATATTAATTATTTTTCCCAGCGCTTTAAGCAGTTGGTTGGAAC
GACACCAAGGCAATATAAAAAAGGAGAAGGCCAATGA

Upstream 100 bases:

>100_bases
GAGTGCTTCAGTTGATATAAGCGAAATGTGATCAGGCTCTTGCCTCTTAGTCCTGCTTAAGAGGTGATAGCTTCTAAAAG
GGTGACTACCGTAAGAGGTA

Downstream 100 bases:

>100_bases
AGCGCTACCCTCTTTTAGTACAATTAGTGAGTTATTTTTTTCTGATTGTGATTTCACTAATCACTATTCTGGGAGTGATT
TATTATCAGACCAGCTCTCA

Product: two-component response regulator YesN-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MAQDLSHLALVEPCKELVWLLLLSFRNSRRNSVYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENP
YDIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKK
TEALQKLVDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDL
RVYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ

Sequences:

>Translated_278_residues
MAQDLSHLALVEPCKELVWLLLLSFRNSRRNSVYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENP
YDIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKK
TEALQKLVDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDL
RVYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ
>Mature_277_residues
AQDLSHLALVEPCKELVWLLLLSFRNSRRNSVYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENPY
DIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKT
EALQKLVDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDLR
VYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ

Specific function: Probable member of the two-component regulatory system SE_0166/SE_0165 [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786251, Length=119, Percent_Identity=31.9327731092437, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788724, Length=151, Percent_Identity=30.4635761589404, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790391, Length=97, Percent_Identity=41.2371134020619, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788550, Length=130, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789402, Length=119, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790863, Length=145, Percent_Identity=28.9655172413793, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082052, Length=122, Percent_Identity=31.1475409836066, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790437, Length=155, Percent_Identity=28.3870967741935, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=29.5081967213115, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1786784, Length=122, Percent_Identity=29.5081967213115, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 31951; Mature: 31820

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDLSHLALVEPCKELVWLLLLSFRNSRRNSVYSLLIVEDEYLVRQGIRSLVDFDQFAI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
DRIAEAENGQVAWELFQENPYDIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDF
HHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCH
NYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKTEALQKLVDKPQQEGSEIKL
HHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHH
AIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDL
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCH
RVYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCCC
>Mature Secondary Structure 
AQDLSHLALVEPCKELVWLLLLSFRNSRRNSVYSLLIVEDEYLVRQGIRSLVDFDQFAI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
DRIAEAENGQVAWELFQENPYDIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDF
HHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCH
NYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKTEALQKLVDKPQQEGSEIKL
HHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHH
AIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDL
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCH
RVYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]