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The map label for this gene is comB [H]

Identifier: 195977663

GI number: 195977663

Start: 545343

End: 546710

Strand: Direct

Name: comB [H]

Synonym: Sez_0522

Alternate gene names: 195977663

Gene position: 545343-546710 (Clockwise)

Preceding gene: 195977662

Following gene: 195977664

Centisome position: 26.94

GC content: 31.8

Gene sequence:

>1368_bases
ATGAATAACAATATATTAGAAAGTGCGGAATTTTATAACCGTCGTTACCACAACTTTTCTAGTCGTGTCATTCTACCTAC
TTTGCTGCTTTTCTTGTTTGGTGTTTTCTTCCTAGCATTTGCAAAGAAAGAAATTTCTATTATTTCAACTGCAACAGTTG
AACCAAATATAATTCTTTCCAATATTCAATCTACAAGTAATAATACAATATTAACCAATAATCTAAAAGATAATAAATAT
GTCAAATTTGGAGACTTATTGATAAAATATGATTCAAGAAAAGAAGGTATTCAACAAGAGACCTATCAAACTCAATTAAA
TAATTTACAAATCCAAAAAGAACAGTTAGAGCTATTAAAAGCAAGTATTGAAGCTGGAAACAGTCAATTTCCAGAAAAAG
ATAATTATGGATATTATCAAACATTTATTGACTACTTAAATCAGATAAACACCTTATCAGCCAATGTAAATCAGCAAAAT
GAAAATGTCTCTTCACAAAATACTGCAGCTAGCAATCAGCAAGTAGAAATTGAGAATGCCATCAAAGGTCTCACAAGTCA
AATTTCAGATTATCAATCTGTTCGCTCGGCGATTCAAAATGGAACAGTGGTAGATCTTGATAATCGGGCTTATTCTATCT
ATAGGAGTTATCTAACTCAAACATCGAGTTTGGTAGATAATACTGATAAAACCGCTGTTATTAATCAATTTGTTGCTCAA
ATTGATAGTCAGATCAATCAACTAGAGAGTAGTGTAGCTGGTTATCGGATTCAGCATGCTGGTTCAGGAGTGCAACAATC
TTACTCTTCAACTCTAGAGAGTCAACTGGCTTCCTTAAAAGCGCAAAGCATAACCAAAGTTGAGCAAGAGTTGTCTGCTT
TGTCGAATCAAATTACAGAATTAGAGGGAACAAATAAACTTCAGAAGAACACATCATCTAAGACCTCTATAGTTGCCAAT
GAAGATGGTGTGTTGCATCTTAATCAGGAATTTATTGGTGCAAATATTGTTCCTGAAGGAACAATATTTGCTCAAGTTTA
TCCAGAAATGAAAAAAGGAACTGTTGTAAAAATCACAGGTTATTTACCTTCGACGGAAATATCAAGTATTTCTATTGGAG
ATACAGCACGATTTTCCACGAAAGATGATAATGGCGAAACTCTTGATTTAATAGTTAAATTATCTAGTATTGACAATGCT
GCAACTAAAACAAAAAATGGGAATTATTTTAAAGTTGAATCTAAGTTACAGCTTAAAGAAAAAGAAGCTCAATTATTGAA
ATATGGGCTTGAGGGTAAATTTATTTTAATTACGGGAACAAAAAGTTACTTGAATTACTATATTGATAAATTTATCGGTG
AGAAGTAA

Upstream 100 bases:

>100_bases
TGGATAAAGGAAAGATCATAGAGCAAGGAACACACAGAGACCTTGTTTCTCAGAATGGCTTTTATGCTCACTTGGTCAAT
AGTTAGGAGGATTTGATAAA

Downstream 100 bases:

>100_bases
ACTGGATCATCGTTTTAATATCAGGAAGCTATCTTAAGTTTTTAGTAATGAAGAATATTTATCTACTCTAGGTTCTGAGG
GACACTGAAATAGTGGAATT

Product: transport protein ComB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNNNILESAEFYNRRYHNFSSRVILPTLLLFLFGVFFLAFAKKEISIISTATVEPNIILSNIQSTSNNTILTNNLKDNKY
VKFGDLLIKYDSRKEGIQQETYQTQLNNLQIQKEQLELLKASIEAGNSQFPEKDNYGYYQTFIDYLNQINTLSANVNQQN
ENVSSQNTAASNQQVEIENAIKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYLTQTSSLVDNTDKTAVINQFVAQ
IDSQINQLESSVAGYRIQHAGSGVQQSYSSTLESQLASLKAQSITKVEQELSALSNQITELEGTNKLQKNTSSKTSIVAN
EDGVLHLNQEFIGANIVPEGTIFAQVYPEMKKGTVVKITGYLPSTEISSISIGDTARFSTKDDNGETLDLIVKLSSIDNA
ATKTKNGNYFKVESKLQLKEKEAQLLKYGLEGKFILITGTKSYLNYYIDKFIGEK

Sequences:

>Translated_455_residues
MNNNILESAEFYNRRYHNFSSRVILPTLLLFLFGVFFLAFAKKEISIISTATVEPNIILSNIQSTSNNTILTNNLKDNKY
VKFGDLLIKYDSRKEGIQQETYQTQLNNLQIQKEQLELLKASIEAGNSQFPEKDNYGYYQTFIDYLNQINTLSANVNQQN
ENVSSQNTAASNQQVEIENAIKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYLTQTSSLVDNTDKTAVINQFVAQ
IDSQINQLESSVAGYRIQHAGSGVQQSYSSTLESQLASLKAQSITKVEQELSALSNQITELEGTNKLQKNTSSKTSIVAN
EDGVLHLNQEFIGANIVPEGTIFAQVYPEMKKGTVVKITGYLPSTEISSISIGDTARFSTKDDNGETLDLIVKLSSIDNA
ATKTKNGNYFKVESKLQLKEKEAQLLKYGLEGKFILITGTKSYLNYYIDKFIGEK
>Mature_455_residues
MNNNILESAEFYNRRYHNFSSRVILPTLLLFLFGVFFLAFAKKEISIISTATVEPNIILSNIQSTSNNTILTNNLKDNKY
VKFGDLLIKYDSRKEGIQQETYQTQLNNLQIQKEQLELLKASIEAGNSQFPEKDNYGYYQTFIDYLNQINTLSANVNQQN
ENVSSQNTAASNQQVEIENAIKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYLTQTSSLVDNTDKTAVINQFVAQ
IDSQINQLESSVAGYRIQHAGSGVQQSYSSTLESQLASLKAQSITKVEQELSALSNQITELEGTNKLQKNTSSKTSIVAN
EDGVLHLNQEFIGANIVPEGTIFAQVYPEMKKGTVVKITGYLPSTEISSISIGDTARFSTKDDNGETLDLIVKLSSIDNA
ATKTKNGNYFKVESKLQLKEKEAQLLKYGLEGKFILITGTKSYLNYYIDKFIGEK

Specific function: Required for induction of competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50813; Mature: 50813

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNILESAEFYNRRYHNFSSRVILPTLLLFLFGVFFLAFAKKEISIISTATVEPNIILS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEE
NIQSTSNNTILTNNLKDNKYVKFGDLLIKYDSRKEGIQQETYQTQLNNLQIQKEQLELLK
CCCCCCCCEEEECCCCCCCEEEECCEEEEECCHHCCHHHHHHHHHHHCCEEHHHHHHHHH
ASIEAGNSQFPEKDNYGYYQTFIDYLNQINTLSANVNQQNENVSSQNTAASNQQVEIENA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHH
IKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYLTQTSSLVDNTDKTAVINQFVAQ
HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IDSQINQLESSVAGYRIQHAGSGVQQSYSSTLESQLASLKAQSITKVEQELSALSNQITE
HHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEGTNKLQKNTSSKTSIVANEDGVLHLNQEFIGANIVPEGTIFAQVYPEMKKGTVVKITG
CCCCCHHHHCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEE
YLPSTEISSISIGDTARFSTKDDNGETLDLIVKLSSIDNAATKTKNGNYFKVESKLQLKE
CCCCCCCCEEECCCCCEECCCCCCCCEEEEEEEEHHCCCHHHCCCCCCEEEECCHHHHHH
KEAQLLKYGLEGKFILITGTKSYLNYYIDKFIGEK
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNNILESAEFYNRRYHNFSSRVILPTLLLFLFGVFFLAFAKKEISIISTATVEPNIILS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEE
NIQSTSNNTILTNNLKDNKYVKFGDLLIKYDSRKEGIQQETYQTQLNNLQIQKEQLELLK
CCCCCCCCEEEECCCCCCCEEEECCEEEEECCHHCCHHHHHHHHHHHCCEEHHHHHHHHH
ASIEAGNSQFPEKDNYGYYQTFIDYLNQINTLSANVNQQNENVSSQNTAASNQQVEIENA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHH
IKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYLTQTSSLVDNTDKTAVINQFVAQ
HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IDSQINQLESSVAGYRIQHAGSGVQQSYSSTLESQLASLKAQSITKVEQELSALSNQITE
HHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEGTNKLQKNTSSKTSIVANEDGVLHLNQEFIGANIVPEGTIFAQVYPEMKKGTVVKITG
CCCCCHHHHCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEE
YLPSTEISSISIGDTARFSTKDDNGETLDLIVKLSSIDNAATKTKNGNYFKVESKLQLKE
CCCCCCCCEEECCCCCEECCCCCCCCEEEEEEEEHHCCCHHHCCCCCCEEEECCHHHHHH
KEAQLLKYGLEGKFILITGTKSYLNYYIDKFIGEK
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883181; 11463916; 1987129; 8407811 [H]