| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
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The map label for this gene is glyS [H]
Identifier: 195977628
GI number: 195977628
Start: 506249
End: 508291
Strand: Direct
Name: glyS [H]
Synonym: Sez_0487
Alternate gene names: 195977628
Gene position: 506249-508291 (Clockwise)
Preceding gene: 195977627
Following gene: 195977630
Centisome position: 25.01
GC content: 46.26
Gene sequence:
>2043_bases ATGATGACAAAAGATTTACTTGTAGAACTTGGTCTTGAAGAGCTTCCTGCCTACGTTGTCACACCTAGTGAAAAGCAGCT TGTGCAGCGTATGACTGATTTTCTTAAGGCCAATCGGCTTAGCTATAACGCAATCGAAGGCTTTTCAACGCCACGTCGTT TAGCGGTGCGTGTGCTGGGCTTAGCTGATCAGCAGACTGATCTGACAGAGGATTTTAAGGGCCCTTCTAAAAAAATTGCT CTTGACGCAGATGGTCAATTTTCAAAAGCCGCTCAGGGCTTTGTTCGTGGAAAGGGCTTGACTGTTGATGACATCGAATT CCGAGAGGTCAAAGGTGAGGAATACGTTTATGTCACCAAGCATGAAGCGGGCAAGCAGGCTAAGGACGTCTTAGCAGCGG TGCCAGAGGTTCTTGCTTCCTTGACCTTCCCAGTCAGCATGCACTGGGCTAACAATAGCTTTGACTATATTCGTCCGGTG CATAGCTTGATTGTACTGTTAGATGATGAGCCTTTGGAGCTTGACTTTTTAGACATTCATTCGGGACGTATCAGTCGCGG ACATCGCTTCCTTGGAGAAGAGACTAGCATTACAAGTGCTGATTCCTATGAGGCTGACCTGCGCAGCCAATTTGTCATTG CCTCTGCTAAGGAGCGCCAAGAAATGATCATAGCGCAAATCAGAGCCATTGAAGCAGAGCAAAAGGTTCAGGTAGATATT GATGAGAACCTCTTAAACGAAGTGCTCAATCTAGTAGAATACCCAACTGCTTTCATGGGAAGCTTTGATCCCAAGTACCT AGAAATTCCAGAAGAGGTGCTCGTAACCTCAATGAAGAACCATCAGCGTTATTTTGTCGTGCGTGATCAGGCTGGCAAGC TAATGCCGAATTTTATTTCTGTTCGTAACGGTAATGCTAAGCATCTTCAAAATGTGATTAAGGGCAATGAAAAGGTGCTT GTTGCTCGTCTTGAAGATGGAGAATTTTTCTGGCGTGAGGACCAAAAGCTATCTATTGAGGATTTGGTTGCTAAGCTAGC TCATGTGACCTTCCATGAAAAGATAGGCTCTCTGGCTGAGCATATGGACCGGACCAAGGTTATTGCAGCCTTTCTTGCTG ACCAGGCTGGGCTCTCAGAAGCAGAAAAAAGTGCTGTTGCTCGTGCTGCCCAGATTTATAAATTTGACCTGCTAACTGGC ATGGTTGGGGAATTTGATGAGCTACAAGGCATTATGGGAGAGAAATACGCCCTTTTAGCTGGCGAAGCTGCTGCTGTCGC AACAGCGATTCGTGAGCATTATTTGCCGGATTCGGCAGAAGGAGAGCTACCTGAAACAAAGGTTGGTGCTGTTCTTGCTC TTGCTGATAAGCTAGACACCCTGCTGTCCTTTTTCTCTGTTGGTTTGATACCGTCAGGCTCAAATGATCCTTATGCCCTA CGTCGTGCAACTCAGGGGATCGTTCGAATTCTTGAGCATTTCGGCTGGAGCATTCCTATGGATAAGCTGATTGATAGCCT ATATGAGCTGTCATTTGATAGCTTGACCTATCAGCATAAGGCTGAGGTGCTGGACTTTATTTGTGCACGTGTGGATAAAA TGATGGGCTCAGCCATTCCAAAGGATATACGTGAAGCAGTTCTGGCTAGCTCAAGCTTTGTTGTACCAGAAATGTTAGCA AGAGCAAAGGCTCTGGTTGCGGCAAGCCAGCTAGACACCTACAAGCCTGCTGTCGAGTCGCTGTCTCGCGTCTTTAATCT AGCGAAAAAGGCAGTTGACGCTGTGCTGATTGATGCTAGCCTCTTTGAAAATGACTACGAAAGGGCTCTGGCACAGGCTG TTGATTCACTAGTGCTATCTGGATCAGCCAAAGAACAGCTAGCTCAGGTCTTTGCCCTTAGTCCAGTTATTGATGACTTT TTTGACCATACGATGGTCATGACAGAGGACGAAGCTATTAGACGTAACCGTTTAGCGCTTTTAGCAGAGCTGGTTACAAA GGTGCAGACCATTGCGGCCTTTGACCGATTAAACACTAAATAA
Upstream 100 bases:
>100_bases ATGGGACAAATCTTGTAGACAAAGGATCGCTCAGGCTTGCCCAAGGCATGCTAGAATTGGTTTGATCTACTTTTTTAGAT TTGATACCCATAGGATTTTA
Downstream 100 bases:
>100_bases TTCGCTGTGTAAGGCTAAGCACATCGCCCTGTGTTAGCTGTTTGTATTGCCTAGATGATAACAGGTGACTAGTCACCTGC CTTGGGCTAGGCCCTGCCCT
Product: glycyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MMTKDLLVELGLEELPAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGPSKKIA LDADGQFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTKHEAGKQAKDVLAAVPEVLASLTFPVSMHWANNSFDYIRPV HSLIVLLDDEPLELDFLDIHSGRISRGHRFLGEETSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISVRNGNAKHLQNVIKGNEKVL VARLEDGEFFWREDQKLSIEDLVAKLAHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTG MVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSNDPYAL RRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQHKAEVLDFICARVDKMMGSAIPKDIREAVLASSSFVVPEMLA RAKALVAASQLDTYKPAVESLSRVFNLAKKAVDAVLIDASLFENDYERALAQAVDSLVLSGSAKEQLAQVFALSPVIDDF FDHTMVMTEDEAIRRNRLALLAELVTKVQTIAAFDRLNTK
Sequences:
>Translated_680_residues MMTKDLLVELGLEELPAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGPSKKIA LDADGQFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTKHEAGKQAKDVLAAVPEVLASLTFPVSMHWANNSFDYIRPV HSLIVLLDDEPLELDFLDIHSGRISRGHRFLGEETSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISVRNGNAKHLQNVIKGNEKVL VARLEDGEFFWREDQKLSIEDLVAKLAHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTG MVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSNDPYAL RRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQHKAEVLDFICARVDKMMGSAIPKDIREAVLASSSFVVPEMLA RAKALVAASQLDTYKPAVESLSRVFNLAKKAVDAVLIDASLFENDYERALAQAVDSLVLSGSAKEQLAQVFALSPVIDDF FDHTMVMTEDEAIRRNRLALLAELVTKVQTIAAFDRLNTK >Mature_680_residues MMTKDLLVELGLEELPAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGPSKKIA LDADGQFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTKHEAGKQAKDVLAAVPEVLASLTFPVSMHWANNSFDYIRPV HSLIVLLDDEPLELDFLDIHSGRISRGHRFLGEETSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISVRNGNAKHLQNVIKGNEKVL VARLEDGEFFWREDQKLSIEDLVAKLAHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTG MVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSNDPYAL RRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQHKAEVLDFICARVDKMMGSAIPKDIREAVLASSSFVVPEMLA RAKALVAASQLDTYKPAVESLSRVFNLAKKAVDAVLIDASLFENDYERALAQAVDSLVLSGSAKEQLAQVFALSPVIDDF FDHTMVMTEDEAIRRNRLALLAELVTKVQTIAAFDRLNTK
Specific function: Unknown
COG id: COG0751
COG function: function code J; Glycyl-tRNA synthetase, beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1789982, Length=681, Percent_Identity=37.0044052863436, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006194 - InterPro: IPR015944 - InterPro: IPR002311 [H]
Pfam domain/function: PF02092 tRNA_synt_2f [H]
EC number: =6.1.1.14 [H]
Molecular weight: Translated: 75546; Mature: 75546
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTKDLLVELGLEELPAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLG CCCHHHHHHHCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH LADQQTDLTEDFKGPSKKIALDADGQFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTK CCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEC HEAGKQAKDVLAAVPEVLASLTFPVSMHWANNSFDYIRPVHSLIVLLDDEPLELDFLDIH CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHEEEEECCCCCEEEEEECC SGRISRGHRFLGEETSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS CHHHHHHHHHHHHCCHHHHCCCCCHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHE VRNGNAKHLQNVIKGNEKVLVARLEDGEFFWREDQKLSIEDLVAKLAHVTFHEKIGSLAE ECCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTGMVGEFDELQGIMGEKYALLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEC GEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSNDPYAL CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQHKAEVLDFICARVDKMMGSAIP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDIREAVLASSSFVVPEMLARAKALVAASQLDTYKPAVESLSRVFNLAKKAVDAVLIDAS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFENDYERALAQAVDSLVLSGSAKEQLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLAL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH LAELVTKVQTIAAFDRLNTK HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMTKDLLVELGLEELPAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLG CCCHHHHHHHCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH LADQQTDLTEDFKGPSKKIALDADGQFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTK CCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEC HEAGKQAKDVLAAVPEVLASLTFPVSMHWANNSFDYIRPVHSLIVLLDDEPLELDFLDIH CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHEEEEECCCCCEEEEEECC SGRISRGHRFLGEETSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS CHHHHHHHHHHHHCCHHHHCCCCCHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHE VRNGNAKHLQNVIKGNEKVLVARLEDGEFFWREDQKLSIEDLVAKLAHVTFHEKIGSLAE ECCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTGMVGEFDELQGIMGEKYALLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEC GEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSNDPYAL CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQHKAEVLDFICARVDKMMGSAIP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDIREAVLASSSFVVPEMLARAKALVAASQLDTYKPAVESLSRVFNLAKKAVDAVLIDAS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFENDYERALAQAVDSLVLSGSAKEQLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLAL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH LAELVTKVQTIAAFDRLNTK HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA