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The map label for this gene is yvgT [H]

Identifier: 195977604

GI number: 195977604

Start: 485549

End: 486151

Strand: Direct

Name: yvgT [H]

Synonym: Sez_0463

Alternate gene names: 195977604

Gene position: 485549-486151 (Clockwise)

Preceding gene: 195977603

Following gene: 195977605

Centisome position: 23.99

GC content: 46.77

Gene sequence:

>603_bases
ATGTGGGAAATTTTAAGCATTATTGGAACAATAGCCTTTGCCTTGTCCGGTGCCATTGTTGCTATGGAGGAGGAGTTTGA
CGTTCTAGGGATTTTTATTCTTGGCTTTGTCACAGCCTTTGGTGGTGGAGCGATTAGAAATACCCTGATAGGGCTGCCTA
TTGAAGCGCTATGGGGGCAACGGCCCGAGTTTGCCTGCGCTTTTATAGCTATTGTTCTGATCATGCTTTTTCCAAGGCTT
GTAGCTAAGGGCTGGGTCAGAGCAGCGGTGCTAACTGATGCTATTGGGCTTGCAGCCTTTAGTGTTCAGGGGGCTTTACA
TGCTGTTCGACTGGCCCAGCCCTTAAGCGCTGTTATTGTAGCAGCGGTTCTTACAGGGGCAGGTGGTGGTGTGGTCAGAG
ATGTTCTGGCAGGCCGTAAGCCAACTGTTCTTAGAAGTGAGATTTATGCTGGCTGGTCTATTATAGCAGCACTTGTGCTT
TATTTTAAGCTGGCCACTTCAAATGTTGAATGCTACTTGCTGGTTGTTTTATTGACAGTCATGCGTATGATTGGCAACAA
AAGACAATGGCACCTACCTAAGATAAAATGGAAAGAGGACTGA

Upstream 100 bases:

>100_bases
GTTTTAGGGGCAGTTGCTCTTATTTTGACTTATATTTTGTCTAAAAACATGGTAGACTAGTAGAGGATTAGTAGATACTA
GGTGAGTTATGACAATCGAC

Downstream 100 bases:

>100_bases
TACGATGATTCAGCTTATAGCAATTGATTTAGACGGTACCCTGCTGGATAGCAAAAAGCACATTCCAAAAGAGAATATCA
AGGCTATCCAAGCAGCTGCA

Product: rhomboid family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MWEILSIIGTIAFALSGAIVAMEEEFDVLGIFILGFVTAFGGGAIRNTLIGLPIEALWGQRPEFACAFIAIVLIMLFPRL
VAKGWVRAAVLTDAIGLAAFSVQGALHAVRLAQPLSAVIVAAVLTGAGGGVVRDVLAGRKPTVLRSEIYAGWSIIAALVL
YFKLATSNVECYLLVVLLTVMRMIGNKRQWHLPKIKWKED

Sequences:

>Translated_200_residues
MWEILSIIGTIAFALSGAIVAMEEEFDVLGIFILGFVTAFGGGAIRNTLIGLPIEALWGQRPEFACAFIAIVLIMLFPRL
VAKGWVRAAVLTDAIGLAAFSVQGALHAVRLAQPLSAVIVAAVLTGAGGGVVRDVLAGRKPTVLRSEIYAGWSIIAALVL
YFKLATSNVECYLLVVLLTVMRMIGNKRQWHLPKIKWKED
>Mature_200_residues
MWEILSIIGTIAFALSGAIVAMEEEFDVLGIFILGFVTAFGGGAIRNTLIGLPIEALWGQRPEFACAFIAIVLIMLFPRL
VAKGWVRAAVLTDAIGLAAFSVQGALHAVRLAQPLSAVIVAAVLTGAGGGVVRDVLAGRKPTVLRSEIYAGWSIIAALVL
YFKLATSNVECYLLVVLLTVMRMIGNKRQWHLPKIKWKED

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=168, Percent_Identity=36.3095238095238, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1786352, Length=209, Percent_Identity=33.0143540669856, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21532; Mature: 21532

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEILSIIGTIAFALSGAIVAMEEEFDVLGIFILGFVTAFGGGAIRNTLIGLPIEALWGQ
CHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCC
RPEFACAFIAIVLIMLFPRLVAKGWVRAAVLTDAIGLAAFSVQGALHAVRLAQPLSAVIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLTGAGGGVVRDVLAGRKPTVLRSEIYAGWSIIAALVLYFKLATSNVECYLLVVLLTV
HHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MRMIGNKRQWHLPKIKWKED
HHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWEILSIIGTIAFALSGAIVAMEEEFDVLGIFILGFVTAFGGGAIRNTLIGLPIEALWGQ
CHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCC
RPEFACAFIAIVLIMLFPRLVAKGWVRAAVLTDAIGLAAFSVQGALHAVRLAQPLSAVIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLTGAGGGVVRDVLAGRKPTVLRSEIYAGWSIIAALVLYFKLATSNVECYLLVVLLTV
HHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MRMIGNKRQWHLPKIKWKED
HHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]