Click here to switch to the map view.

The map label for this gene is 195977524

Identifier: 195977524

GI number: 195977524

Start: 406020

End: 406703

Strand: Direct

Name: 195977524

Synonym: Sez_0379

Alternate gene names: NA

Gene position: 406020-406703 (Clockwise)

Preceding gene: 195977523

Following gene: 195977525

Centisome position: 20.06

GC content: 46.93

Gene sequence:

>684_bases
ATGAGGCTTGATGTTCGCACAAAATTGCTCCTGTTAATTCTAGCCAATGCCTGCTTCTTTTTTCGGATTGATGGCTGGCT
GGGGACGATGATTATAGGCGTTTTGCTTGGTATTTTGTTTTGGCTTGGTCAAGGGCGTCTGGCAATCGGTATGACACTGC
TCTATGCCTTATTGCTTGGTTTGTCTGTATTGCCGCTTCATGTGCTGCTGCCAGTCTATCTGTTTAGGCTGCTGAGCTTT
GCAGCTGTTGCTGGTCAATTGCTTTACCCATCTGTGCTTGCTGCCTTGATTTTTGTCAAGACAACGACTGCCTACGAGCT
TGTGCATGGGCTGCGAAAATGGCATGTGCCAGAGGTTTGTCTGTTGACCCTGGCTGTCATGCTGCGCTTTTTACCTAAGA
TTAGGCAGGAAGGAAAGGTTATTCGGCAATCTCTGAAAATCAGGGGCATTTTCTTGGACAGCTGGGCTATTGTCAGACAG
CCAAGGCGGTATATGGAGTATCTCTTGGTACCGCTGTTGATGTCATTGCTCAGAAGCAGTCAGGACTTAACCATTGCTAG
CCTAACAAAAGGGCTGGCAATCAAAAAGGGAGCAAGTGAGTGCTTCGTATCACATCTATCATGGAAGGATTGGGGGGTAC
AGATTTGGATACTTGCAACGATAATCTACATGGTTCTCCAGTGA

Upstream 100 bases:

>100_bases
TCAGCTGGTTTGTTGGTGTTGTCCTGCTTTGTGCCTTAGTAGGTGGCCTTTTTGGTCAATACCTGCTGAAAAAGCATTTT
GCTAAGTCAGGAATGCTTTT

Downstream 100 bases:

>100_bases
TCAAGACAAAGCAGCTGCAGTTTTCCTATACCAATCGTAGGCAGACTGCCTGTGAGCTTAGGGATTGTCAGGTAGAGGCA
GGTCAATTTATTGTGCTTTG

Product: transport protein

Products: NA

Alternate protein names: Cobalt Transport Protein CbiQ; Cobalt ABC Transporter; ABC Transporter Permease Protein; Cobalt ABC Transporter Permease

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRLDVRTKLLLLILANACFFFRIDGWLGTMIIGVLLGILFWLGQGRLAIGMTLLYALLLGLSVLPLHVLLPVYLFRLLSF
AAVAGQLLYPSVLAALIFVKTTTAYELVHGLRKWHVPEVCLLTLAVMLRFLPKIRQEGKVIRQSLKIRGIFLDSWAIVRQ
PRRYMEYLLVPLLMSLLRSSQDLTIASLTKGLAIKKGASECFVSHLSWKDWGVQIWILATIIYMVLQ

Sequences:

>Translated_227_residues
MRLDVRTKLLLLILANACFFFRIDGWLGTMIIGVLLGILFWLGQGRLAIGMTLLYALLLGLSVLPLHVLLPVYLFRLLSF
AAVAGQLLYPSVLAALIFVKTTTAYELVHGLRKWHVPEVCLLTLAVMLRFLPKIRQEGKVIRQSLKIRGIFLDSWAIVRQ
PRRYMEYLLVPLLMSLLRSSQDLTIASLTKGLAIKKGASECFVSHLSWKDWGVQIWILATIIYMVLQ
>Mature_227_residues
MRLDVRTKLLLLILANACFFFRIDGWLGTMIIGVLLGILFWLGQGRLAIGMTLLYALLLGLSVLPLHVLLPVYLFRLLSF
AAVAGQLLYPSVLAALIFVKTTTAYELVHGLRKWHVPEVCLLTLAVMLRFLPKIRQEGKVIRQSLKIRGIFLDSWAIVRQ
PRRYMEYLLVPLLMSLLRSSQDLTIASLTKGLAIKKGASECFVSHLSWKDWGVQIWILATIIYMVLQ

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25749; Mature: 25749

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDVRTKLLLLILANACFFFRIDGWLGTMIIGVLLGILFWLGQGRLAIGMTLLYALLLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSVLPLHVLLPVYLFRLLSFAAVAGQLLYPSVLAALIFVKTTTAYELVHGLRKWHVPEVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LLTLAVMLRFLPKIRQEGKVIRQSLKIRGIFLDSWAIVRQPRRYMEYLLVPLLMSLLRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCHHHHHHHHHHHHHHHHHHCC
QDLTIASLTKGLAIKKGASECFVSHLSWKDWGVQIWILATIIYMVLQ
CCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLDVRTKLLLLILANACFFFRIDGWLGTMIIGVLLGILFWLGQGRLAIGMTLLYALLLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSVLPLHVLLPVYLFRLLSFAAVAGQLLYPSVLAALIFVKTTTAYELVHGLRKWHVPEVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LLTLAVMLRFLPKIRQEGKVIRQSLKIRGIFLDSWAIVRQPRRYMEYLLVPLLMSLLRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCHHHHHHHHHHHHHHHHHHCC
QDLTIASLTKGLAIKKGASECFVSHLSWKDWGVQIWILATIIYMVLQ
CCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA