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The map label for this gene is ssb2 [H]

Identifier: 195977488

GI number: 195977488

Start: 363738

End: 364226

Strand: Direct

Name: ssb2 [H]

Synonym: Sez_0343

Alternate gene names: 195977488

Gene position: 363738-364226 (Clockwise)

Preceding gene: 195977487

Following gene: 195977489

Centisome position: 17.97

GC content: 46.83

Gene sequence:

>489_bases
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAATTGTGTGATCT
GGCGGCAGCAGGCTGAAAATTTAGCTAACTGGGCCAAAAAGGGTGCCTTGATTGGGATTACAGGACGTATTCAGACCCGT
AACTACGAAAACCAACAGGGGCAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAGCTCGTCTGGCTCATATGGTGGTGGCTTTAATGGCTCACCGGCAGCCAATAGCTATTCAGCGCCTA
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA

Upstream 100 bases:

>100_bases
TGTAGCTCTTAATGAGTTTGACCGTCTGTCAAAAATCAACGGTGACATTCTTCGTCACATGATCGTTAAGCTTGACGCTT
AATTGTAAAGTAGGTAGTTT

Downstream 100 bases:

>100_bases
GCAATGGAAAGTGGACTGACATGAATTGCATAGATTTGCTGGTAGCTTGGGAGACAGAGGAGTTGCTTTCAAGCACAAAA
GATTGAGGCCTCTTTCTGGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDL
PF

Sequences:

>Translated_162_residues
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDL
PF
>Mature_162_residues
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDL
PF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17766; Mature: 17766

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAEN
CCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGG
HHHHHHCCCEEEEECEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
FNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAEN
CCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGG
HHHHHHCCCEEEEECEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
FNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA