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The map label for this gene is ydiC [H]

Identifier: 195977431

GI number: 195977431

Start: 307317

End: 308015

Strand: Direct

Name: ydiC [H]

Synonym: Sez_0286

Alternate gene names: 195977431

Gene position: 307317-308015 (Clockwise)

Preceding gene: 195977428

Following gene: 195977432

Centisome position: 15.18

GC content: 44.92

Gene sequence:

>699_bases
ATGAAGACACTTGCATTTGACACATCAAATAAGGCATTATCTGTTGCTCTATTAGACGACGACACATTATTGGCTGATCT
TACGATTAATGTTAAGAAGAATCACAGTATTAGTCTGATGCCGGCTATTGATTTTTTAATGTCCTCAGCTGACCTGAAGC
CAAAGGATCTTGATCGGATCGTAGTAGCAGAAGGGCCGGGTTCCTATACTGGCTTGCGTGTTGCTACTGCTACAGCAAAA
ATGCTTGCTTATAGCCTAAGTATTGACCTCGTTGGCGTATCAAGCCTATATGCCCTAGCGGCTTCTACTTGTCGAGAAAA
CCCTGATAGCTTGGTTGTCCCTTTGATTGATGCTAGACGACGCCATGTTTATGTGGGCTATTATCACCATCAAAAAGCTG
TGAAACAGGATAAGTACGCATCCTTTGATGCTGTTTTAGCAGATCTGGTCTCTTACGACCATGTGATTTTTGTTGGAGAA
GTGGAGGGCTTTGCAGAGGATATTCGATCAGCCTTGCCAGAGGCCAAGATAAAGCCAAGTTTGCCATCGGCTTTTGAGGT
TGGTTTGCTAGGCAGCAGCCTTTCAGCTGACAATGTAGCAGCCTTTGTCCCACAATATTTGAAGCGGGTTGAGGCAGAGG
AAAACTGGCTCAAAACTCATGCTGCCGGTGATGACAGCCAGTATGTCAAGCGAGTTTAG

Upstream 100 bases:

>100_bases
TATTCGCTTGACCGGTGATGAGGCTGTGGCTGTCTCCTTTTCCATGACCTTTATTTTATGTTATAATTGTGGAATAGAAA
TGACTTGAGAAGGGCTTAGT

Downstream 100 bases:

>100_bases
CGATGATGTCTATCCAAGAAAAAGCAGCAGCTGTCTATCAGGTGCTAAAAGAGGTCTATGGTCAATCCCCTTGGACCTTA
AAGCAGATAGTGTCTGATAT

Product: putative molecular chaperone metal-dependent protease-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKTLAFDTSNKALSVALLDDDTLLADLTINVKKNHSISLMPAIDFLMSSADLKPKDLDRIVVAEGPGSYTGLRVATATAK
MLAYSLSIDLVGVSSLYALAASTCRENPDSLVVPLIDARRRHVYVGYYHHQKAVKQDKYASFDAVLADLVSYDHVIFVGE
VEGFAEDIRSALPEAKIKPSLPSAFEVGLLGSSLSADNVAAFVPQYLKRVEAEENWLKTHAAGDDSQYVKRV

Sequences:

>Translated_232_residues
MKTLAFDTSNKALSVALLDDDTLLADLTINVKKNHSISLMPAIDFLMSSADLKPKDLDRIVVAEGPGSYTGLRVATATAK
MLAYSLSIDLVGVSSLYALAASTCRENPDSLVVPLIDARRRHVYVGYYHHQKAVKQDKYASFDAVLADLVSYDHVIFVGE
VEGFAEDIRSALPEAKIKPSLPSAFEVGLLGSSLSADNVAAFVPQYLKRVEAEENWLKTHAAGDDSQYVKRV
>Mature_232_residues
MKTLAFDTSNKALSVALLDDDTLLADLTINVKKNHSISLMPAIDFLMSSADLKPKDLDRIVVAEGPGSYTGLRVATATAK
MLAYSLSIDLVGVSSLYALAASTCRENPDSLVVPLIDARRRHVYVGYYHHQKAVKQDKYASFDAVLADLVSYDHVIFVGE
VEGFAEDIRSALPEAKIKPSLPSAFEVGLLGSSLSADNVAAFVPQYLKRVEAEENWLKTHAAGDDSQYVKRV

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=130, Percent_Identity=31.5384615384615, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25234; Mature: 25234

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAFDTSNKALSVALLDDDTLLADLTINVKKNHSISLMPAIDFLMSSADLKPKDLDRI
CCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCEE
VVAEGPGSYTGLRVATATAKMLAYSLSIDLVGVSSLYALAASTCRENPDSLVVPLIDARR
EEECCCCCCCCEEHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCC
RHVYVGYYHHQKAVKQDKYASFDAVLADLVSYDHVIFVGEVEGFAEDIRSALPEAKIKPS
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCC
LPSAFEVGLLGSSLSADNVAAFVPQYLKRVEAEENWLKTHAAGDDSQYVKRV
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure
MKTLAFDTSNKALSVALLDDDTLLADLTINVKKNHSISLMPAIDFLMSSADLKPKDLDRI
CCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCEE
VVAEGPGSYTGLRVATATAKMLAYSLSIDLVGVSSLYALAASTCRENPDSLVVPLIDARR
EEECCCCCCCCEEHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCC
RHVYVGYYHHQKAVKQDKYASFDAVLADLVSYDHVIFVGEVEGFAEDIRSALPEAKIKPS
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCC
LPSAFEVGLLGSSLSADNVAAFVPQYLKRVEAEENWLKTHAAGDDSQYVKRV
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]