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The map label for this gene is cbbE [H]

Identifier: 195977407

GI number: 195977407

Start: 281082

End: 281744

Strand: Direct

Name: cbbE [H]

Synonym: Sez_0260

Alternate gene names: 195977407

Gene position: 281082-281744 (Clockwise)

Preceding gene: 195977406

Following gene: 195977408

Centisome position: 13.89

GC content: 45.4

Gene sequence:

>663_bases
ATGTCATCTCTGAAAATTGCGCCATCTATTTTAGCAGCCGACTATGCTTGCTTTGCTGCTGAGCTGGCCCGTATTGAAAA
AACAAATGCTGAATACGTTCATATTGATATCATGGACGGTCAGTTTGTGCCAAATATCAGCTTTGGGGCAGATGTTGTTG
CTAGCATGCGTAAGCACAGCAAGCTAGTCTTTGATTGCCACTTGATGGTTGTGAATCCTGAGAGATATGTTGAGGCCTTT
GCTCAGGCAGGAGCTGATATCATGACCATTCATGTGGAGAGTACTCTTCATAGTCATGGTGCCTTGCAAAAGATCAGGGC
TGCTGGTATGAAGGCTGGTGTGGTGATTAATCCTGGGACACCTGTCTCTGCGGTTGAGCCTTTATTAAGCTTAGTAGATC
AGGTGCTGATCATGACTGTTAATCCAGGCTTTGGGGGACAGGCCTTTATCCCGGACTGCTTGGAAAAGGTTGCAGCTATT
GCTAAAATGAGAGATGAAAGAGGCTTGAGCTTTGATATTGAGGTTGATGGTGGTGTTGATGACAAGACCATTCGTGCTTG
CTATCAAGCAGGAGCTAATGTCTTTGTAGCTGGCTCTTATCTGTTTAAGGCAGTGGATTTGGCAGCTCAAGTGCAAACAT
TGAGGGCGGCTCTTAATGGTTAA

Upstream 100 bases:

>100_bases
TCTGGTCTGTTCGCTATCAGAATTACCTTCAATTTCTGAGTGAAATCGAAAACCGTCGGGAAACATATCAAAAAGTTAGT
AAAAGAAAGTAGGTTTAACC

Downstream 100 bases:

>100_bases
GGTAGCCCTCTTTGCAGGTGGGGATTTGTCCTATTTTACCTGTGATTTTGATTATTTTGTTGGAATTGATAGAGGAAGTC
TATTTTTGTTAGAAAATGGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVNPERYVEAF
AQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAI
AKMRDERGLSFDIEVDGGVDDKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRAALNG

Sequences:

>Translated_220_residues
MSSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVNPERYVEAF
AQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAI
AKMRDERGLSFDIEVDGGVDDKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRAALNG
>Mature_219_residues
SSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVNPERYVEAFA
QAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAIA
KMRDERGLSFDIEVDGGVDDKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRAALNG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=216, Percent_Identity=43.9814814814815, Blast_Score=184, Evalue=6e-47,
Organism=Homo sapiens, GI219879828, Length=216, Percent_Identity=41.6666666666667, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI24307923, Length=167, Percent_Identity=37.125748502994, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI1789788, Length=219, Percent_Identity=42.0091324200913, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI1790523, Length=215, Percent_Identity=39.5348837209302, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1790754, Length=206, Percent_Identity=29.6116504854369, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=218, Percent_Identity=41.743119266055, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6322341, Length=214, Percent_Identity=41.588785046729, Blast_Score=168, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=44.811320754717, Blast_Score=185, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23466; Mature: 23335

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
KLVFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGT
CEEEEEEEEEECHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCC
PVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAIAKMRDERGLSFDIEVDGGVD
CHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
DKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRAALNG
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
KLVFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGT
CEEEEEEEEEECHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEECCCC
PVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAIAKMRDERGLSFDIEVDGGVD
CHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
DKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRAALNG
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA