| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
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The map label for this gene is srlM [H]
Identifier: 195977352
GI number: 195977352
Start: 226516
End: 228384
Strand: Direct
Name: srlM [H]
Synonym: Sez_0205
Alternate gene names: 195977352
Gene position: 226516-228384 (Clockwise)
Preceding gene: 195977351
Following gene: 195977353
Centisome position: 11.19
GC content: 44.73
Gene sequence:
>1869_bases GTGACATTAGTTAATCGTTGGTATCGCATTTTAGAGCCCTTAGTTGCCCAAAATCAAATGGCCTTTGAAGAGCTGCGGCT TCAATTAGATGTAAGTGCACAGACCCTTGCTAAGAGCATCGAGCAGCTCAATGACATTCTTGATGGAGATGCGACCATCA CCCAACAAGGCGCCTTTTTGCAGCTGCAGGTCTATGATTATGCTAGATTAGAGACGATATTAGCTGGTAGCTTACGTAAG GCTAGTGATTTTAATTCCGCTAGCAAGCGAGTAGCTTATCTTCTAAAAAGACTGCTGCAAAGCTCCTCAGCCTTAGTCAT TGATGATTTGGCTGATGAGATTGGCGTCAGTCGCAGCACGATCAATAAAGACCTAAAGACAGCCAAGGCCCTTGCTAGGT CTTATTCGGTCATGATTCAAGGCAAGCCCAATCATGGCATACAGGCTGTTGGCACTGAGTTGAACCTTCGGCTGCTTTAT GTTCATGAGGTTTACAAATACTTTGAGCCGCAGGGCCTGTCTGGTGATAGCTTGTTTTTTCTAGACGAGCTGTATCAGAC CTACCAGCTTCCTCGCAAAATCCAAGAGCTTTTGACCAAGAGCCTTGCGATAACCATTGAGCGAATGCGTCAGGGGAGGT ATCTGACAGACCCTATTCCTTACTACAGCAATGAGGTTGATTCCAATGCCTTTATGGAGGAGCTGGTCTGTCACATCGAG CTAGCTTACCAGCTGTCACTGAGCCAATACGAGCGCCAGTTTATTAGCTTTCCCTTGAATATCCAATACATCGAGGGCCT AGCCTATCAGGAAAGGCCTCTGCAAGAGAGCATTGTCAGGCTTTATTCAAAAATGATTGAGCAAATCAAGGCCAGTCTCT TGGTGACTATTGACCAAGACAAGCTTTTTGTCGCTTTGCATACGCATTTAAAGCTCTTAGTGAATCGTTTGATTTTTCAT GTTCAGGCCAATGATATTTTTCATGGAGAAATTAGATACAAATACCCCTTGGCCTTTGATATGGCCAATGTCGCAGCTCA GGTCTTAGCAGAGGAGTTTGACTGTGCCATAGAGTTATCTGAGTGCAGCTACTTGGCCCTTTATTTTGAAATGATGATGC AAGACGCTGAGCATGTGACAGAGCCAACAGTGAAAAAAATTGCAGTTGTCTGCACGACAGGTCGTGGCACTGCCAATATG ATTTGTCGTCGCTTGAGCAAGGTGCTAGGTCCTGATTTGTTGATCTCACAATTCTCTGAGGAGCAATTCAATCCGGCTGA TAATGATCACTATTTTGCCATATTCACCACTGTGCCGCTGAAGTTTGGTCAGCTAAAATCTCCTGTTGTCCAAATCACAA ATCTGTTTGATGACCAGTGGCTGCAAAATGAATGGCGCAGGGTACATCATTATCACCAGAAAAACCTAACGACCATCACC CTGCACTTTGCTCGTCTGTCAAAGGGGAAGGCTTATACTGACTACCTGATTGAAATGGCGGAGCTGCTTGAGGACAAGCA GCTGGTTGACAGGCAGTTTGGCCAACGCCTGCTAGAGCGTGAGGCCCTGCAATCAACCTTATTTGGTAATCGCATTGCCT TTCCACATACGATTAATGACAAGGAAACAAAGACTGTTCTGTTGCTAGGCCTATTAGATGAACCTTATCGTGAGCATGAC TGTCTGGTGGAGTTTATTTTTCTAGTGGCTATTCCCAAAAGGGTTGAAGCGCAGATGGAGGCTGATCTCTTGGACATTTA CGATGATATTTTCAAAATAGCAAGCGACGATAAGCTTCAGGCGGAGCTAAGAGGCCTAAAAAATCAAGCTGATTTTATCG CATTTACCAAGGAAAAAGGAGTTTTTTAA
Upstream 100 bases:
>100_bases GCTTATTACATATCAGATCGCTCAAGTTATATTACGGGCATTACAACAAATGTAGCAGGTGGTAAAACGAGAGGCTAGTA TCTGACAAGAGAGGTAGGAC
Downstream 100 bases:
>100_bases TGAGTTTCATGGTTATTTTTGGACTATTTGTCATAGCTGCTTACCTTTTTCAATTATTGTTAGGCCTGAGACAGCTTAAG CACTTCAATGCTGTTTATGC
Product: sorbitol operon transcription regulator SrlM
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MTLVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDATITQQGAFLQLQVYDYARLETILAGSLRK ASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRSTINKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLY VHEVYKYFEPQGLSGDSLFFLDELYQTYQLPRKIQELLTKSLAITIERMRQGRYLTDPIPYYSNEVDSNAFMEELVCHIE LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQDKLFVALHTHLKLLVNRLIFH VQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELSECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANM ICRRLSKVLGPDLLISQFSEEQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTIT LHFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAFPHTINDKETKTVLLLGLLDEPYREHD CLVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIASDDKLQAELRGLKNQADFIAFTKEKGVF
Sequences:
>Translated_622_residues MTLVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDATITQQGAFLQLQVYDYARLETILAGSLRK ASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRSTINKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLY VHEVYKYFEPQGLSGDSLFFLDELYQTYQLPRKIQELLTKSLAITIERMRQGRYLTDPIPYYSNEVDSNAFMEELVCHIE LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQDKLFVALHTHLKLLVNRLIFH VQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELSECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANM ICRRLSKVLGPDLLISQFSEEQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTIT LHFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAFPHTINDKETKTVLLLGLLDEPYREHD CLVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIASDDKLQAELRGLKNQADFIAFTKEKGVF >Mature_621_residues TLVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDATITQQGAFLQLQVYDYARLETILAGSLRKA SDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRSTINKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLYV HEVYKYFEPQGLSGDSLFFLDELYQTYQLPRKIQELLTKSLAITIERMRQGRYLTDPIPYYSNEVDSNAFMEELVCHIEL AYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQDKLFVALHTHLKLLVNRLIFHV QANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELSECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANMI CRRLSKVLGPDLLISQFSEEQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTITL HFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAFPHTINDKETKTVLLLGLLDEPYREHDC LVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIASDDKLQAELRGLKNQADFIAFTKEKGVF
Specific function: Positive regulator of the licABCH operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 71673; Mature: 71542
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDATITQQGAFL CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEE QLQVYDYARLETILAGSLRKASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRST EEEECHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCHHH INKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLYVHEVYKYFEPQGLSGDSLFF HHHHHHHHHHHHHHHEEEEECCCCCCCEEECCEEEEEEEEHHHHHHHHCCCCCCCCCHHH LDELYQTYQLPRKIQELLTKSLAITIERMRQGRYLTDPIPYYSNEVDSNAFMEELVCHIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQD HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCC KLFVALHTHLKLLVNRLIFHVQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELS CEEEHHHHHHHHHHHHHHEEEECCCEEECEEEEECCHHHHHHHHHHHHHHHHHCCEEEHH ECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANMICRRLSKVLGPDLLISQFSE HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHH EQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTIT HCCCCCCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LHFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAFPHTIND EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KETKTVLLLGLLDEPYREHDCLVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIASDDKLQ CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AELRGLKNQADFIAFTKEKGVF HHHHCCCCCCCEEEEECCCCCC >Mature Secondary Structure TLVNRWYRILEPLVAQNQMAFEELRLQLDVSAQTLAKSIEQLNDILDGDATITQQGAFL CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEE QLQVYDYARLETILAGSLRKASDFNSASKRVAYLLKRLLQSSSALVIDDLADEIGVSRST EEEECHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCHHH INKDLKTAKALARSYSVMIQGKPNHGIQAVGTELNLRLLYVHEVYKYFEPQGLSGDSLFF HHHHHHHHHHHHHHHEEEEECCCCCCCEEECCEEEEEEEEHHHHHHHHCCCCCCCCCHHH LDELYQTYQLPRKIQELLTKSLAITIERMRQGRYLTDPIPYYSNEVDSNAFMEELVCHIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAYQLSLSQYERQFISFPLNIQYIEGLAYQERPLQESIVRLYSKMIEQIKASLLVTIDQD HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCC KLFVALHTHLKLLVNRLIFHVQANDIFHGEIRYKYPLAFDMANVAAQVLAEEFDCAIELS CEEEHHHHHHHHHHHHHHEEEECCCEEECEEEEECCHHHHHHHHHHHHHHHHHCCEEEHH ECSYLALYFEMMMQDAEHVTEPTVKKIAVVCTTGRGTANMICRRLSKVLGPDLLISQFSE HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHH EQFNPADNDHYFAIFTTVPLKFGQLKSPVVQITNLFDDQWLQNEWRRVHHYHQKNLTTIT HCCCCCCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LHFARLSKGKAYTDYLIEMAELLEDKQLVDRQFGQRLLEREALQSTLFGNRIAFPHTIND EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KETKTVLLLGLLDEPYREHDCLVEFIFLVAIPKRVEAQMEADLLDIYDDIFKIASDDKLQ CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AELRGLKNQADFIAFTKEKGVF HHHHCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377; 10438772 [H]