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The map label for this gene is nusG [H]

Identifier: 195977307

GI number: 195977307

Start: 173010

End: 173555

Strand: Direct

Name: nusG [H]

Synonym: Sez_0160

Alternate gene names: 195977307

Gene position: 173010-173555 (Clockwise)

Preceding gene: 195977306

Following gene: 195977309

Centisome position: 8.55

GC content: 42.86

Gene sequence:

>546_bases
ATGTTAGATTCTTTTGATAAGGGCTGGTTTGTCCTTCAAACTTACTCAGGCTATGAAAATAAGGTAAAAGAAAACCTTTT
GCAGCGTGCTCAGACCTATAACATGCTAGACAATATTCTCCGCGTTGAGATTCCTACCCAAACGGTAAATGTTGAAAAAA
ATGGTCAGGTCAAAGAGGTTGAGGAAAACCGCTTCCCAGGATATGTTTTGGTTGAGATGGTTATGACTGATGACGCTTGG
TTTGTTGTTCGTAACACACCAAATGTGACAGGCTTTGTCGGATCGCATGGTAATCGCTCAAAACCAACCCCTCTGCTTGA
AGAGGAGATTCGCGCAATCCTGTTGTCAATGGGGCAAACTGTTGATGTCTTTGATACGAATATCAAAGAAGGTGATGTGG
TTCAAATCATTGATGGCGCCTTTATCGGGCAAGAGGGACGTGTTGTAGAGATTGAAAACAACAAGGTCAAGCTCATGCTT
AATATGTTTGGCTCAGAAACCTTAGCAGAGGTCGAGCTTTACCAAATCGCAGAGCTATCGTCCTGA

Upstream 100 bases:

>100_bases
ATTAATGCGTTGACAGCCAATCCTTCTTCTATTATAATGAAAGTGTGATAACAGCAATGCAAAGGCCAACAGAGGCTTTT
TTATAATGAAAGGAAGTAAC

Downstream 100 bases:

>100_bases
TAGACTCTTAAAACGATTATTCATACCATATAAAAATAAAAGGCTGGCATCGGCTTTCTCAGATACCGATGTTAGGTCTT
TTTTTGTTGGTCTCCTACGA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGQVKEVEENRFPGYVLVEMVMTDDAW
FVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRAILLSMGQTVDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLML
NMFGSETLAEVELYQIAELSS

Sequences:

>Translated_181_residues
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGQVKEVEENRFPGYVLVEMVMTDDAW
FVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRAILLSMGQTVDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLML
NMFGSETLAEVELYQIAELSS
>Mature_181_residues
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGQVKEVEENRFPGYVLVEMVMTDDAW
FVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRAILLSMGQTVDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLML
NMFGSETLAEVELYQIAELSS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=180, Percent_Identity=35, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20512; Mature: 20512

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGQVKEV
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCEEEH
EENRFPGYVLVEMVMTDDAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRAILLSMGQT
HCCCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCE
VDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLMLNMFGSETLAEVELYQIAELS
EEEEECCCCCCCEEEEECCEEECCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGQVKEV
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCEEEH
EENRFPGYVLVEMVMTDDAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRAILLSMGQT
HCCCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCE
VDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLMLNMFGSETLAEVELYQIAELS
EEEEECCCCCCCEEEEECCEEECCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]