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The map label for this gene is infA [H]

Identifier: 195977230

GI number: 195977230

Start: 81288

End: 81560

Strand: Direct

Name: infA [H]

Synonym: Sez_0078

Alternate gene names: 195977230

Gene position: 81288-81560 (Clockwise)

Preceding gene: 195977229

Following gene: 195977231

Centisome position: 4.02

GC content: 39.19

Gene sequence:

>273_bases
TTGTTACCTCTGTGCTCAGAGGACATCAAATCGAAATTTAGGGGGTACTTTTGCGTGGCAAAAGAAGACGTGATTGAAAT
TGAAGGTAAAGTTGTCGAAACTATGCCAAATGCAATGTTTACTGTTGAATTGGAAAATGGACATCAGATTTTAGCAACCG
TATCAGGAAAGATCCGCAAAAATTACATTCGTATTTTAGTGGGTGATCGTGTTACTGTAGAGATGAGTCCTTACGACTTG
ACACGTGGACGTATCACATACCGCTTTAAATAG

Upstream 100 bases:

>100_bases
TGCTGACATTAAAAAGGTCATCGAAAACCTGAAATAAATTCCAGAAAATCGCTTGCGAAAGTGATTTTATCGTGATATAC
TAGACTAGTCTGACTTATAA

Downstream 100 bases:

>100_bases
TCGAAATAATTGGAGGGATTAAAACATGAAGGTAAGACCATCGGTTAAACCAATTTGCGAATACTGCAAGGTTATTCGTC
GTAACGGTCGTGTTATGGTA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLPLCSEDIKSKFRGYFCVAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDL
TRGRITYRFK

Sequences:

>Translated_90_residues
MLPLCSEDIKSKFRGYFCVAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDL
TRGRITYRFK
>Mature_90_residues
MLPLCSEDIKSKFRGYFCVAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDL
TRGRITYRFK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=67.1428571428571, Blast_Score=106, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 10360; Mature: 10360

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLCSEDIKSKFRGYFCVAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRK
CCCCCCHHHHHHCCEEEEEECCCEEEECCEEEECCCCEEEEEEECCCCEEEEEECCCEEE
NYIRILVGDRVTVEMSPYDLTRGRITYRFK
EEEEEEECCEEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MLPLCSEDIKSKFRGYFCVAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRK
CCCCCCHHHHHHCCEEEEEECCCEEEECCEEEECCCCEEEEEEECCCCEEEEEECCCEEE
NYIRILVGDRVTVEMSPYDLTRGRITYRFK
EEEEEEECCEEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA