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The map label for this gene is secY [H]

Identifier: 195977228

GI number: 195977228

Start: 79127

End: 80431

Strand: Direct

Name: secY [H]

Synonym: Sez_0076

Alternate gene names: 195977228

Gene position: 79127-80431 (Clockwise)

Preceding gene: 195977227

Following gene: 195977229

Centisome position: 3.91

GC content: 38.01

Gene sequence:

>1305_bases
ATGTTCTTAAAAATACTCAAAGACGCATTGAAGATAAAGAATGTTAGAAATAAAATATTTTTTACAATCTTTATTATCCT
TATATTCCGTATTGGAACACATATCACTGTTCCTGGTGTAAATGCAAAAAGCTTAGAGCAGCTGAGTGAGCTTCCTTTCC
TAAATATGTTGAACTTGGTCAGCGGTAATGCAATGAGAAACTTTTCAGTTTTCTCAATGGGTGTTAGTCCCTATATTACA
GCCTCAATCGTTGTTCAGCTATTGCAGATGGATATTTTGCCGAAGTTTGTTGAGTGGGGAAAACAAGGTGAGGTTGGCCG
TCGTAAGCTAAACCAAGCGACGCGCTATATTTCCCTTGTCTTAGCCTTTGCTCAATCTATCGGTATTACAGCAGGCTTTA
ACACCTTATCAAGTGTAGCTCTAGTCAAAACACCAGATGTAAGAACCTATTTACTGATTGGAGCTTTACTGACAACAGGT
AGTGTGATTGTGACCTGGCTTGGTGAACAGATTACCGATAAAGGCTTTGGTAATGGGGTTTCTATGATTATCTTTGCAGG
TATCATTTCCTCTATTCCAAATGCTATTGCAACCATTCGTGAGGATTATTTTGTCAATGTGAAGTCAGGTGACCTACAGT
CATCTTATATCGTTGTTGGTATTCTCATTCTTGCAGTGCTTGCTATCGTCTTTTTCACAACGTATGTTCAGCAGGCGGAA
TATAAAATTCCAATCCAATATACAAAGCTTGTTCAGGGTGCGCCTACAAGCTCATACCTTCCCTTAAAAGTAAATCCAGC
TGGTGTTATTCCCGTTATCTTTGCCAGCTCGATTACAACAATTCCAAGTACGATTATCCCGTTCTTTCAAAATGGCAGAG
ATATTCCATGGTTGACAACTTTGCAAGGAATTTTTAACTATCAATCTCCAACAGGAATGATTGTTTATGCCTTGTTAATT
ATCCTGTTTTCATTCTTCTATACCTTTGTTCAAGTAAATCCTGAGAAAACAGCTGAAAATCTACAGAAGAATTCGTCCTA
TATTCCAAGTGTTAGACCTGGACGAGAAACAGAAGAATTTATGTCATCCTTGCTAAAGAAATTGGCAACTGTGGGTGCTA
TCTTCCTAGCATTTATATCTCTTGTTCCAATTGCGGCACAACAAGCTCTTAACCTATCTTCTAGTATTGCATTAGGTGGA
ACTAGCTTGCTGATTTTGATTTCGACAGGTATCGAAGGTATGAAGCAGCTTGAAGGTTACCTTCTCAAGAGAAAATATGT
CGGATTTATGAATATTACAGAATAG

Upstream 100 bases:

>100_bases
AAATTGACTGTTAAAGCAGCGAAATTTTCAAAATCTGCTGAAGCAGCCATTACTGCTAAGGGTGGTTCAATAGAAGTCAT
CTAATGAGGGGATACTCATT

Downstream 100 bases:

>100_bases
AATATGGGTTGACACTGTCAACCTTCTATTTTGTTTTTAAATGACAATAAGATTTACAGAGCCTTGGTTCCTATCTTCTT
ATTGCCATTTGAAAACAAAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFLKILKDALKIKNVRNKIFFTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSSVALVKTPDVRTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPNAIATIREDYFVNVKSGDLQSSYIVVGILILAVLAIVFFTTYVQQAE
YKIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGRDIPWLTTLQGIFNYQSPTGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEEFMSSLLKKLATVGAIFLAFISLVPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNITE

Sequences:

>Translated_434_residues
MFLKILKDALKIKNVRNKIFFTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSSVALVKTPDVRTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPNAIATIREDYFVNVKSGDLQSSYIVVGILILAVLAIVFFTTYVQQAE
YKIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGRDIPWLTTLQGIFNYQSPTGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEEFMSSLLKKLATVGAIFLAFISLVPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNITE
>Mature_434_residues
MFLKILKDALKIKNVRNKIFFTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT
ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSSVALVKTPDVRTYLLIGALLTTG
SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPNAIATIREDYFVNVKSGDLQSSYIVVGILILAVLAIVFFTTYVQQAE
YKIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGRDIPWLTTLQGIFNYQSPTGMIVYALLI
ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEEFMSSLLKKLATVGAIFLAFISLVPIAAQQALNLSSSIALGG
TSLLILISTGIEGMKQLEGYLLKRKYVGFMNITE

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=39.0070921985816, Blast_Score=261, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47648; Mature: 47648

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKILKDALKIKNVRNKIFFTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH
SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LAFAQSIGITAGFNTLSSVALVKTPDVRTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV
HHHHHHCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
SMIIFAGIISSIPNAIATIREDYFVNVKSGDLQSSYIVVGILILAVLAIVFFTTYVQQAE
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGRDIPWLTT
CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LQGIFNYQSPTGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEEF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MSSLLKKLATVGAIFLAFISLVPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCHHHHHHHHHH
LLKRKYVGFMNITE
HHHHHHCCCEECCC
>Mature Secondary Structure
MFLKILKDALKIKNVRNKIFFTIFIILIFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH
SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LAFAQSIGITAGFNTLSSVALVKTPDVRTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV
HHHHHHCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
SMIIFAGIISSIPNAIATIREDYFVNVKSGDLQSSYIVVGILILAVLAIVFFTTYVQQAE
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFFQNGRDIPWLTT
CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LQGIFNYQSPTGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEEF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MSSLLKKLATVGAIFLAFISLVPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCHHHHHHHHHH
LLKRKYVGFMNITE
HHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]