Click here to switch to the map view.

The map label for this gene is mreD

Identifier: 195977173

GI number: 195977173

Start: 25704

End: 26207

Strand: Direct

Name: mreD

Synonym: Sez_0017

Alternate gene names: NA

Gene position: 25704-26207 (Clockwise)

Preceding gene: 195977172

Following gene: 195977174

Centisome position: 1.27

GC content: 32.94

Gene sequence:

>504_bases
ATGAAAAAATCTTCAGAGCTATTAGTCCTTTTGCCTTTTCTTTTATTTTTTGTTGATGCACACGTGTCAGACCTGATCAG
CTCAATGTTACCTGAGGGTTACTCGGTAGTATCACACCTCTTTTTACTGTTTTTCCTGATCCTTATGGTAGCGTTTAGAT
CTAAGGGAGTTATTTGTTTCTTCTCTCTTCTTTTAGGATTATTGTTTGATTATTATTATTTTGATCATATAGGGATTTTG
TCTCTTGCCTTGCCTTTTGGAACAATGATCGTTCTAGGGCTATTAAGGTTCTTTTCTGGTTCCATTAGTCAGCTACAATT
TTTCCTTTTCTTTACTCTTTATATGTTTCTTGTAGATGTATCAAGCTTTATTTTGGCAAACAGCTATCAGTTAACTGATA
TGACTTTTCCTTATGTAATGACGTTTCAGCTTGCTCCGACTTTAATCGTCAATCTCCTTATTTTGTTTTGCTTTAGAAAA
TTAATATTAAGTCAATTTTATTGA

Upstream 100 bases:

>100_bases
TTAAAAATGCTGCTGATAAGCTAAAGCGTCGTATTTTTATAAAATTGTATGCTGATACTGATAATCTTGACTATGTTCTT
GTTGTTGGAAAAGAGTGAAT

Downstream 100 bases:

>100_bases
TTATTACATACAACTGTAACAGATGCGTAACATTAAACGCTTGATTTTTTGATAGAATATAATGTGTCTTATCGAAAAGG
AGTAATTTTTTTAGTATGAA

Product: cell shape-determining protein MreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKSSELLVLLPFLLFFVDAHVSDLISSMLPEGYSVVSHLFLLFFLILMVAFRSKGVICFFSLLLGLLFDYYYFDHIGIL
SLALPFGTMIVLGLLRFFSGSISQLQFFLFFTLYMFLVDVSSFILANSYQLTDMTFPYVMTFQLAPTLIVNLLILFCFRK
LILSQFY

Sequences:

>Translated_167_residues
MKKSSELLVLLPFLLFFVDAHVSDLISSMLPEGYSVVSHLFLLFFLILMVAFRSKGVICFFSLLLGLLFDYYYFDHIGIL
SLALPFGTMIVLGLLRFFSGSISQLQFFLFFTLYMFLVDVSSFILANSYQLTDMTFPYVMTFQLAPTLIVNLLILFCFRK
LILSQFY
>Mature_167_residues
MKKSSELLVLLPFLLFFVDAHVSDLISSMLPEGYSVVSHLFLLFFLILMVAFRSKGVICFFSLLLGLLFDYYYFDHIGIL
SLALPFGTMIVLGLLRFFSGSISQLQFFLFFTLYMFLVDVSSFILANSYQLTDMTFPYVMTFQLAPTLIVNLLILFCFRK
LILSQFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19287; Mature: 19287

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSELLVLLPFLLFFVDAHVSDLISSMLPEGYSVVSHLFLLFFLILMVAFRSKGVICF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FSLLLGLLFDYYYFDHIGILSLALPFGTMIVLGLLRFFSGSISQLQFFLFFTLYMFLVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSFILANSYQLTDMTFPYVMTFQLAPTLIVNLLILFCFRKLILSQFY
HHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSSELLVLLPFLLFFVDAHVSDLISSMLPEGYSVVSHLFLLFFLILMVAFRSKGVICF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FSLLLGLLFDYYYFDHIGILSLALPFGTMIVLGLLRFFSGSISQLQFFLFFTLYMFLVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSFILANSYQLTDMTFPYVMTFQLAPTLIVNLLILFCFRKLILSQFY
HHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA