Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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Identifier: 195953981

GI number:

Start: 1529552

End: 1533157

Strand: Direct

Name: Not Available

Synonym: HY04AAS1_1612

Alternate gene names: NA

Gene position: NA

Preceding gene: 195953977

Following gene: 195953982

Centisome position: NA

GC content: NA

Gene sequence:

>3606_bases
ATGAAAGATTTTGTGCATCTTCATCTTCACACCCAATATTCGCTTTTGGACGGAGCTATAAAGATAAAGGATTTGGCTAA
AAAGGCAAAGGAATACGGCTATAAGGCTGTGGCTATAACGGATCATGGTAACCTTTTTGGTACTATGAGCTTTTACAAAG
AGATGAAGGCAAACGGTATAAAGCCCATTATAGGTATGGAAGCTTACTTTACCACAGGAAAAAGAACTGAGCATAAAGGA
AAAGGTTCTGAAGATAACATAACAGATAGAATAAACCACCATATCATACTTTTGGCAAAAAACGACACTGGGCTTAAAAA
CCTCATGAAGCTTTCTTCTATAGCTTTTATTGAAGGCTTTTACTATAAACCAAGGATAGATTATGAAGTGTTAGAGCAGC
ATGCGGAAGGTCTAATCGCTTTGACGGCCTGTCTTAAGGGAGTGCCTACTTTTTACGCAGCTCAAGGCAACGAAGAGATG
GCTTATAATTGGGTTAAAAAGTTTAAAGATATCTTTGGGGATGATCTTTATTTAGAGCTTCAATCAAATCATATACCAGC
TCAGGAAACCGCCAATAAAACCCTTATAGATATAGCCAAAAGATACAACGTAAAGTTTGCGGCCACCAACGATTGTCATT
ACCTTTTGGAAGAAGATTTGAGGGCTCACAACGTGTTGATGGCAATTCAGATGAAAAAAACACTTCAGGAGCTTGGAGAA
GATGCTTTTGGGCACTATGATGGTATGCACTTTGCCTCATACGAGGAGATGGTAAAGAAATTTGAAGGAAAGTGGAGTGA
GTGGGAAAAAGCGCTTTTAAACACTGTTGAAATATCAGAAAAAGTTGCAGATTCTTTAAGCATATTTGAAGACAAATCTT
ACAAGTTTCCTGAGTTTTTTAAAGGTGATGATATAAATGTCAATATATCTTCTTACCTTAGAAATTTAGCCGTTGAGGGT
CTTAAAAGCCGTATACAAAAATCTCAAATAAGCAAAAATATACCAGAAAAAGAGTACTGGGACAGACTAAATTATGAATT
AGAAGTAATACAAAATATGGGTTTTGATAGTTATTTCTTGATAGTATCGGATTTTATAAACTGGTCAAAATCAAACAACA
TACCCGTGGGTCCTGGAAGAGGTTCTGCGGCTGGGTCTTTGGTGGCTTTTGCTCTAAACATTACAGACGTTGATCCGTTA
AAGCACGGACTTATCTTCGAAAGATTTTTAAATCCAGAGCGTATATCTATGCCAGATATAGATGTAGACTTTTGCATGGA
CAACCGGGATAAGGTTATAGAGTATGTAAAAGAAAAATACGGCAAAGATTCTGTAGCTCAGATCATTACTTACAATACGA
TGAAAGCTAAACAAACCCTTAGAGATGTGGCAAGGGCCATGGGTATGGCTTACAAAGACGCCGATGTACTAGCAAAACTT
ATACCTCAAGGCAACGTCCAAGGTACTTGGCTAAGCCTTGAAGAGATGTATATAACGCCCATAGAAGAGTTGATGGAGCG
TTATGGACACAGAGGAGATATTGAAGATAATGTAAAAAAATTTAGAGACCTTGCAAAAAAAGACCCTCAGATAAAAGAGC
TTGTGGAAATATCTATAAAACTTGAGGGTCTTACAAGGCATACATCTTTGCATGCTGCTGGTATTGTGATAGCTCCAAAA
CCCCTTATAGAGTTGGCACCTTTGTATCTTGATAAATCGGTAAAAGATGATACTGGCAACATAGCTACCCAATACGATAT
GGCTCATTTAGAAGAGCTTGGGCTTGTCAAAATGGACTTTCTCGGATTAAAAACGCTTACAGAGCTATGGAAGATGAAAG
AGCTTGTAAAACAAAACAAAGGTGTAGATATTGATTTCTTGTCTTTGGATTTTAACAACAAAGAAATTTACGAATTTTTA
GCTACCGGTGAAACGATAGGGGTGTTTCAACTGGAATCAAAGGGCATGAGGGAGCTTATAAAACGTTTAAAACCAGATAG
ATTTGAAGATATTGTAGCCGCTTTAGCCCTTTATAGACCAGGTCCTATAAAAAGCGGGATGGTAGATAAATTTATAAATA
GAAAACTTGGTAAAGAAAAAGTTGTATACGAATTTGAAGAGCTTGAAGAGGTGCTAAAAGAAACTTATGGTCTCATTGTT
TATCAAGAGCAGATCATGTTTATATCAAACATTCTTGCTGGGTTTACCATGGGAGAGGCAGATAATTTGAGAAAGGCTAT
AGGTAAGAAAAAGGCTGATCTCATGGCAAAGATAAAAGATGATTTCATAAGAAGAAGCTGTGAAAGAGGCTATCCTAAGG
ATAAAATAGAAAAACTTTGGTCTGAAATAGAGGAGTTTGCCTCTTATTCTTTCAACAAATCTCACTCTGTGGCTTACGGT
TACATATCTTTTTGGACTGCTTACGTGAAGCTTTACTATCCAGATGAGTTTTATGCTGTGAAATTTTCTACAGAGAACTC
CGATAAGAAGTTTATAAACCTTTTAAAAGATGCGAAGTCTTTTGGTATAAAAGTATTACCTCCAGATGTAAACAAATCCG
ATGTAGATTTTAAGATAGAAGTTCCAAGACACATAAGGTTTGGGCTTGGAAGAATAAAGGGTGTTGGTGAGGATACCGCA
AGACATATAAAATCTATGCAAGAAAAAATTGGAAGAGACTTTCTAAGTTTTCAAGATTTTACCAAAAACACAGACAATAG
GAAAGTGAATAAAAAAGTTTTAGAAGCTCTTTCAAAAGCAGGGGCTTTTGATAGTCTTATAGAAAAAAGCGGTTATAAAA
ATAGAGAAGATTTTCTCTCAAGGCTTTTGAATTCTCAGGATATATCAAGCATAGCCCAGAGGTCGTTGTTTGGTATAAAA
GCCTCGAAATCCACTGAGCAGATGGAACAAAGCTCTTCTATAGATATATTAAAATTAGAAAAGGAGGTTCTTGGTTTTTA
TATATCTGGGCATCCACTGGACAAATACAGCTGGATTTTATCTCACAACAAAGACATAACAAATATAGAAGATATAGATT
TTGACAATATGCCAAACCAAGCCATAGACAGCGAGGCTGGGCAAAACGCATCGGCGGAATATACGATTGTGGGTGTTATA
AGCGATTTACAGATTAAAAAAACCAAAAATGGTTCTTACATGGCTATTTTTAACCTTGTGGATAAAACGGATATTGTTGA
AGTTGTGGTTTTCCCGGATAGGTATGCATCTTCTGAAGGTATTATAAAAGAAGATGAAGTGGTGGTGGTAAAGGGTGTTT
TAGACATAGACATTGAAAATGAAAACCTTAAGATAGTGGCAAATGATCTTTATTCTATAGATTCTTTGCTAAATCAATAC
AACACGCTAACTCTTAAGATAGATGAGGAAAAAGCGAAAAACGGCTTTTTAGAAAAGCTTAAATCTATGCTGGACAAATA
TACGCCTAAGACTAACGAAGATGTTATGAAAACTCAAAAAGTTGTATTGGAACTAGACGTTAGCTCCTATAGGGCTATAG
TACAAACCTCCAAGGATGTGGTGCTTTCAAAAACCCTCATAGAAGAACTCAGTAAATACGGTATAGAATTTTCTTTGGCA
TCTTAA

Upstream 100 bases:

>100_bases
GAGAACATTAGATACTTAAGATGATGGAGCTTGAAGGTCTTTTTGTGGTAAAGCTAAGAAGCTATTTCCAAACTTTTTGT
TTGTACATATAATCAAATTT

Downstream 100 bases:

>100_bases
CGAAAAATTAACAATTCTTTTTTATAATAAAAGCATCAAAACGTAAGGAGGTTTGTATGAAGTTAAAACAAGTTTTAGCG
GTAGCTGTTTTTGCTGGTAG

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1201_residues
MKDFVHLHLHTQYSLLDGAIKIKDLAKKAKEYGYKAVAITDHGNLFGTMSFYKEMKANGIKPIIGMEAYFTTGKRTEHKG
KGSEDNITDRINHHIILLAKNDTGLKNLMKLSSIAFIEGFYYKPRIDYEVLEQHAEGLIALTACLKGVPTFYAAQGNEEM
AYNWVKKFKDIFGDDLYLELQSNHIPAQETANKTLIDIAKRYNVKFAATNDCHYLLEEDLRAHNVLMAIQMKKTLQELGE
DAFGHYDGMHFASYEEMVKKFEGKWSEWEKALLNTVEISEKVADSLSIFEDKSYKFPEFFKGDDINVNISSYLRNLAVEG
LKSRIQKSQISKNIPEKEYWDRLNYELEVIQNMGFDSYFLIVSDFINWSKSNNIPVGPGRGSAAGSLVAFALNITDVDPL
KHGLIFERFLNPERISMPDIDVDFCMDNRDKVIEYVKEKYGKDSVAQIITYNTMKAKQTLRDVARAMGMAYKDADVLAKL
IPQGNVQGTWLSLEEMYITPIEELMERYGHRGDIEDNVKKFRDLAKKDPQIKELVEISIKLEGLTRHTSLHAAGIVIAPK
PLIELAPLYLDKSVKDDTGNIATQYDMAHLEELGLVKMDFLGLKTLTELWKMKELVKQNKGVDIDFLSLDFNNKEIYEFL
ATGETIGVFQLESKGMRELIKRLKPDRFEDIVAALALYRPGPIKSGMVDKFINRKLGKEKVVYEFEELEEVLKETYGLIV
YQEQIMFISNILAGFTMGEADNLRKAIGKKKADLMAKIKDDFIRRSCERGYPKDKIEKLWSEIEEFASYSFNKSHSVAYG
YISFWTAYVKLYYPDEFYAVKFSTENSDKKFINLLKDAKSFGIKVLPPDVNKSDVDFKIEVPRHIRFGLGRIKGVGEDTA
RHIKSMQEKIGRDFLSFQDFTKNTDNRKVNKKVLEALSKAGAFDSLIEKSGYKNREDFLSRLLNSQDISSIAQRSLFGIK
ASKSTEQMEQSSSIDILKLEKEVLGFYISGHPLDKYSWILSHNKDITNIEDIDFDNMPNQAIDSEAGQNASAEYTIVGVI
SDLQIKKTKNGSYMAIFNLVDKTDIVEVVVFPDRYASSEGIIKEDEVVVVKGVLDIDIENENLKIVANDLYSIDSLLNQY
NTLTLKIDEEKAKNGFLEKLKSMLDKYTPKTNEDVMKTQKVVLELDVSSYRAIVQTSKDVVLSKTLIEELSKYGIEFSLA
S

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA