Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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Identifier: 195953778

GI number:

Start: 1319290

End: 1322658

Strand: Direct

Name: Not Available

Synonym: HY04AAS1_1405

Alternate gene names: NA

Gene position: NA

Preceding gene: 195953777

Following gene: 195953781

Centisome position: NA

GC content: NA

Gene sequence:

>3369_bases
ATGAATAATAATAAGATATTAAACGATATATTTAAATACAAAAATATAGCTCTATGGTTTTTTCTGGCTTTTGCATTTAT
ATTTTTTAGCTTAGGTTTAAATTTGTTTTATATAAACAAATACAAAGAAAACACTATCAAAGAAGCAAAAGTTGACTTAA
GAAATAATCTATATACGTTAAAAAATCACATAATCAATGAAAATAGATTAGAGTATTACTTTATGCAAAATATCAAGTAT
ATAATAAATAAATTTGGTATCGATAAAGCTATACATATTATTCAGAGGAACTTTGACAGCAAGAATAGATTGTTTTTTGT
AATAGATAAAAATCTCAATCCCATCGGACATAGATATACACCAAATGAAATATCCATATATCAAAAAGCGCTTTCTAATA
AAAGAATAAAAAACGCCGTTTATAACTGTGTTTTATCTAATAAATACTGTTTTACGACAGCTTTCAATGTGGGCGAAGAT
TACTTCATATTTACCATCTTACCCATAAACAAGACTTCATATCTTCTTCAAATACACAAACCTCCTCTTTACATATACGC
TTCTTCTACAACAGGTTTTTCTTACGGGGTTTTGCTTCCAAACGGTGTCATAAACGCTCATATACCTATTTTGTCTAAAA
GCCAAATACACAAACCTCTTTATGATTTTATAACATCTTATAAAAACCTAGGTTTCGCCCTTGTAAGATACAAATCTCCT
ATAGATGGTGAGCCAAAACTTGCAGCTATCACAAGACTTGATCTTGTGGCTGGTAAAGTTATATATCCTTATGTATCCGC
TTCTCTTCCTTTTGTGTTAAAAGGTTATTACACCAATTTAAGAGCCGTCTTTTTGCCCTGGTTTATATTTGGCGTTATCA
TACTTGGTTTTATAGCTTTTATAATCAAGAAGACCAAAAATGAATATCTTTTGAATCAGGAAAGATACTTTTATGAGGTG
TTGTTTGATAAATATTCTCTTCCGTTACTCCTTATAGACGAAGATGGAAAGATTTTAAAGGTAAATGAACCAGCGTTAAA
GCTGTACGGCTATTCTAAAGAAGAGATTAAAAATATGTATTTATATGAACTTGAAGGAGTGCCAAAAGAGGAATCGGAAA
GGTTGTTAAGAAATATAATACATGGTGATTTAAAAAGTTTTGAATTTATTCATGTTGCTAAAAGCGGCAAAAAGATAAAC
GTAGAAGTTTATGTAAACAAGCTAAGTATGGAAAATAAAACATACATCTTATATACCGTATTTGATATTTCTGAGAAAGT
ATTGTTGGCTAAACTTTTTGATATGTTAAAAGAGGTAAACACTATACTGATAAGTGTGGAACTAGAGAGCGAACTATTAA
ACGGCATAGCAGAGACCATTATAATGTTTGATTTTGACTGCGTTGAGATATTTAAAGTAAAACAAAAAGACAATCTTGAA
CTTATGTTAAAATCTGGAACACCTATTGAAGATATCAGCTTAGAAGAGGAAAAAAGAGCTTTGCTTAGCAAATCTATCAC
TTTACAATCTAAACCTACGTATTCTAAGGCATCTATACCAATACTTTCTCACAATGAAAATGAAGTTGTTTATATTATTA
GCATATATAAAAAAGAATTTCAATTCTTTGATAATTATCATATTGTTAGCATACTTGAAGAGCTTGAGAAAGACATATCT
TTTGCTCTGAAAAAAATCTTGGAAGAGCAAAATAGCCTCATATTAAGAAAAGCCTTAGAAAACTCTAAAGGCTGGGTGCT
TATAACGGATGAAGAAGGTTATATCCTATATGCAAATCAAATGGTATGTGAAATATCTTTGTACTCTTGCGAAGAGGTAA
TAGGTAGAAAACCAAATATATTTAAATCTGGTTATCACGATAACGATTTTTATAAAAGATTATGGCGGACAATAAAATCT
GGCGGTACTTTTGAAAGTATTTTCTACAATAAAAAGAAAAACGGAGAAATCTTTATTTTAGAGGAGTCTATTATTCCTGT
CACATTAAAAGACGGTACTATAAGATATATTACTATAGCAAAAGATATAACCCAAGAAGTAGAGCTTGAAAAAAAGCTAG
AGCGTTTTAGTTTTATGGATTCTGCTACAGGTCTTTTAAATATAAACGGCTTTTCAAAAGCTATAAACGATAGATTGGAG
TATTTAAAAAATCAATCTAAAAAGGGAGCTTTGATACTACTTGATATATATGGATTTTCTATATTAAATCAAATATACGG
TTTCAACAAAGCAGATGAAATTGTAAAAAAAGTAGCAAATATGCTAAAAGAGCTTTTAGAGCCAGAAGATGTTATAATCG
CAAAAATCGGTCCAGATGAGTTTGGTATCTTTAAAGATATAGAGAAAGAAGAAGATTTATTTGCATTTGTTGATAAAATA
AACGACATCTTTGCAAGTGGTATAGAGATAGAACTAGATAATTTTAGAAAACTAGATAAGCTGCATATAAATATGGGGAT
TTCCTTATACGATGAAGATGGTGATAGTTTTGAAAAGCTTTATGAAAGAGCTAGTTTAGCGCTACAAGAAGCTAAAAAGG
ACGGAGAAGGTAAATATAGGTTTTTCTCTAAAGATATAGATATAGTGGTGAAAAGATATGTGGAAGCTCAAGAGCTTGTA
GAAAGAGCTCTGGACAAAGGGTTGTTTAAATTTTTCTATCAGCCTTACTTTGACATTAAGACAAAAGACTTTGTAGGTTT
TGAAGCCCTCATAAGAATAATAGATGAAGATGGTAGTATAATATCTCCTTACAAGTTTATAGATTACCTCGAATCTTCTT
CGTATTTTTTAAATAGATTTCAAGAGGTATTTTTAAAGATGGTTGAAAGCGATATGAATACGTTTATTTCAAAAGCTAAA
TCACATTTTAGCTCTGCTTTCAACATATCTGCAAACAGCTTCAAAGATGATATTTTCATGTCAAAGCTTATAGGCCTTTG
TCATAAGTTTGAGGATAAGCTTGTAATAGAGATTACAGAAAGGATGTTGCTATCAGATTTTGAAAAGGCAAAAGAAATCT
TGAGAAATATAAGATCAGTTGGTAGTAAAGTTGCTTTGGATGACTTTGGCACTTATTACTCTTCCCTTTCCTATGTTAAA
AATGTTGAGCTTGATATTATAAAGATAGATATATCTTTTATAAAGGATATAGTTTTTGATAAAAGAAGTTTGGCGGTGGT
AAAAGCCATAATAAATCTTGCCAAAGCATTAGACATTAAAACAATAGCAGAGGGTGTAGAAAAAGAAGAGCAGTATAACC
TTCTTAAAGAGGCAGGTTGCGATATAGCTCAAGGGTATCTTTTTGCAAAACCTATGCCTATAGAAGAGGCTGTAAAATAT
ATAATCTAA

Upstream 100 bases:

>100_bases
ATAAAAGTTATGCAAGAAAATTTCGATAAGGAAGAGATCAAAGGGCAGGAAAAAGCTAACCCAGATCTAAGCACTATATA
CGTTGGTAAAGATGCTATAA

Downstream 100 bases:

>100_bases
GTTTTTTGGCTTTTAAGATAATCTATAACTGTTTGAACATGCCCATCTACTTTTACATTTTTCCAAGTTTTTTCTATCTC
GCCGTTTTCGTTTATTACAA

Product: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1122_residues
MNNNKILNDIFKYKNIALWFFLAFAFIFFSLGLNLFYINKYKENTIKEAKVDLRNNLYTLKNHIINENRLEYYFMQNIKY
IINKFGIDKAIHIIQRNFDSKNRLFFVIDKNLNPIGHRYTPNEISIYQKALSNKRIKNAVYNCVLSNKYCFTTAFNVGED
YFIFTILPINKTSYLLQIHKPPLYIYASSTTGFSYGVLLPNGVINAHIPILSKSQIHKPLYDFITSYKNLGFALVRYKSP
IDGEPKLAAITRLDLVAGKVIYPYVSASLPFVLKGYYTNLRAVFLPWFIFGVIILGFIAFIIKKTKNEYLLNQERYFYEV
LFDKYSLPLLLIDEDGKILKVNEPALKLYGYSKEEIKNMYLYELEGVPKEESERLLRNIIHGDLKSFEFIHVAKSGKKIN
VEVYVNKLSMENKTYILYTVFDISEKVLLAKLFDMLKEVNTILISVELESELLNGIAETIIMFDFDCVEIFKVKQKDNLE
LMLKSGTPIEDISLEEEKRALLSKSITLQSKPTYSKASIPILSHNENEVVYIISIYKKEFQFFDNYHIVSILEELEKDIS
FALKKILEEQNSLILRKALENSKGWVLITDEEGYILYANQMVCEISLYSCEEVIGRKPNIFKSGYHDNDFYKRLWRTIKS
GGTFESIFYNKKKNGEIFILEESIIPVTLKDGTIRYITIAKDITQEVELEKKLERFSFMDSATGLLNINGFSKAINDRLE
YLKNQSKKGALILLDIYGFSILNQIYGFNKADEIVKKVANMLKELLEPEDVIIAKIGPDEFGIFKDIEKEEDLFAFVDKI
NDIFASGIEIELDNFRKLDKLHINMGISLYDEDGDSFEKLYERASLALQEAKKDGEGKYRFFSKDIDIVVKRYVEAQELV
ERALDKGLFKFFYQPYFDIKTKDFVGFEALIRIIDEDGSIISPYKFIDYLESSSYFLNRFQEVFLKMVESDMNTFISKAK
SHFSSAFNISANSFKDDIFMSKLIGLCHKFEDKLVIEITERMLLSDFEKAKEILRNIRSVGSKVALDDFGTYYSSLSYVK
NVELDIIKIDISFIKDIVFDKRSLAVVKAIINLAKALDIKTIAEGVEKEEQYNLLKEAGCDIAQGYLFAKPMPIEEAVKY
II

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA