Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 195953518

GI number:

Start: 1057801

End: 1059126

Strand: Direct

Name: Not Available

Synonym: HY04AAS1_1144

Alternate gene names: NA

Gene position: NA

Preceding gene: 195953517

Following gene: 195953519

Centisome position: NA

GC content: NA

Gene sequence:

>1326_bases
ATGAAAGATGCCGTTGTAATAGGTGCAGGCGTTAGTGGAATAGTAGCAGCTTATACGCTTAAAAAAGCTGGTTTTGATCC
TCTTGTTATAGAAAAAGAGCCTCACATAGGTGGTTCTACCCATACTTTGAGAGAAGATGGACGTATCATAGAGCTTGGCG
TGCAATCTGTGCTTGGTCAAGAAGAATTTATGGCTTTTGCCAAAGAACTAAATTTAAAGCCTCTACATCCACTAAAAGAG
CACGCCAACACAAGGTACGTATATTTAAACGGTCAGCTTAAGAAAATGCCATCAAACCCGATTGAGTTTTTAACCTCTGA
TTTTTTTTCTATATTTGGTAAAATCAGGCTTTTAAGAGAACCATTTATACCACCAAAAGACGATCCCAAAGAAAGTATAA
GCGATTTTGTAACAAGGCGTCTTGGCAAAGAGTTTTTGGATAAGATAGTAGAACCCTTTGTATGCGGTATATACGCTGGA
GACCCAGACAAATTGTCTGCCAAATACGCCGTTAGAAGGGTAAAAGCCTTAGAAGATGAATATGGGTCTATCATAAAAGG
TTCTATGAAGAAAAAAGCCCTTGGCCCTCAAGGTGAGATCACATCTTTTGAAGGTGGGCTTTTAACATTTTTAGAAAAAA
TGGCCTCTGGCATAGATATATCTTTGGAAAATGTGGCACTTAAAATCACTAAAAAAGACGATATATATACTATAGATACT
AAAAGCGGTAAAATTCAAACAAAATCTATACTCATAGCCACACCAGCCTACAGTGCATCTTATCTTCTTAGAAATCTCAC
TTGGAGCATGTCTGCGGAGTTAGACCAGATAGAGTATGCACCTGTTATAGTGATAAGCGCTATCGTAAAACATCCTCTTC
CAAAGGGTTTTGGGTTTTTAATACCAAGAAAAGAAAATACCATCATGCTTGGAGCACTTTTTTCAAGCAATCTATTTAAA
ATCTGCAAAGAAGATGAAAACATTATCACTATATATGTAGGCGGTGAAAGAAGAAAAGATGTAGCAGATTGGCCAGAGGA
AAAGATCATTTCACAAGTAAAGAAGGAGTTAAAGCAAATACTTGGTATAGAGGATTTTGAAAAATATTATTTCAAAAAAT
GGAAAAAAGCCATACCTCAATACAACATAGGCTACGAGAAATTTATAAACACCGTAAAGGATATAGAGAATATGAACAAA
GGTGTTTTTATAGCAGGAAACTATATTGAAGGTAATTCTTTTAACGACTCTTTAAGATACGCCATGAAAAAAGCAAACGA
ACAAATTTTATTTCTTAAAAAAGGAGTGGCTCATGCACAAGTTTAA

Upstream 100 bases:

>100_bases
AACACGCCTGGATAGCCGGTAGAATGTCTTATTTAGCCGGTAGAATGCCAAAAAGAACATATGCAGTCCCATCATCTCCT
TTAACGGGAGTACCTTTTAA

Downstream 100 bases:

>100_bases
TCCAGAACATTTACATCGTCTTGACAACGAAGAGCGTCTTGAGCTTTTTGACCCAGAGAAAACTCTAAAACAGTTTGGCC
TTAAACCAGGTTATAAAGTG

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>441_residues
MKDAVVIGAGVSGIVAAYTLKKAGFDPLVIEKEPHIGGSTHTLREDGRIIELGVQSVLGQEEFMAFAKELNLKPLHPLKE
HANTRYVYLNGQLKKMPSNPIEFLTSDFFSIFGKIRLLREPFIPPKDDPKESISDFVTRRLGKEFLDKIVEPFVCGIYAG
DPDKLSAKYAVRRVKALEDEYGSIIKGSMKKKALGPQGEITSFEGGLLTFLEKMASGIDISLENVALKITKKDDIYTIDT
KSGKIQTKSILIATPAYSASYLLRNLTWSMSAELDQIEYAPVIVISAIVKHPLPKGFGFLIPRKENTIMLGALFSSNLFK
ICKEDENIITIYVGGERRKDVADWPEEKIISQVKKELKQILGIEDFEKYYFKKWKKAIPQYNIGYEKFINTVKDIENMNK
GVFIAGNYIEGNSFNDSLRYAMKKANEQILFLKKGVAHAQV

Sequences:
NA

Specific function: NA

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA