| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952843
Identifier: 195952843
GI number: 195952843
Start: 405891
End: 406331
Strand: Direct
Name: 195952843
Synonym: HY04AAS1_0465
Alternate gene names: NA
Gene position: 405891-406331 (Clockwise)
Preceding gene: 195952835
Following gene: 195952844
Centisome position: 26.03
GC content: 34.01
Gene sequence:
>441_bases ATGTTAAAGCGGGGAGTGGTTGTTTTAGGGTTTTTTCTATTTGGACATTTGTCTTTTTCTAAACCGCTAAAACTTGATAT AAAAATACCATGTAAGGATGTAAATTTTAAAACTAACTATCATACATACACAAGTATATCATCCCCTTTGCCAAGAGATG AGAAGCAAAGTGTGGGATTTTCATTCTTTTTCAACAGGCTTCCTTCTGTAAGCGCTATAGTGGATAATATCAGGTCTCTT AATTTATCAAAAACTTATCAAGAACCACCCCCAGAGATATACACCTCTGATATAAGGAGACATGCTGATTATTACGAAAA AGATATTATTACCAAAAATACATATATAAGACCTACCAACAAAGGCAATGAACTTGTTCAACTTTATAAAAACGATCCCC AGCTGGATTTTGGTGTAGCTCTAAACGCTCGTTTCAAATAG
Upstream 100 bases:
>100_bases CGTCTACTAAGCCTATATATGTGTCTCTTAACATGCTTATATTATATACTAAAAATCTTATATCATTGAAATTTTATTTG ATAGGTATATAATAAATTTT
Downstream 100 bases:
>100_bases TGAAAACTTGATCTAAACTTGATTTACTTGCTATATAGTAATTTTTTTTGAAATTTCATTTTTAGTTAGTATATATATAC TTTTTATTAAAAAATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLKRGVVVLGFFLFGHLSFSKPLKLDIKIPCKDVNFKTNYHTYTSISSPLPRDEKQSVGFSFFFNRLPSVSAIVDNIRSL NLSKTYQEPPPEIYTSDIRRHADYYEKDIITKNTYIRPTNKGNELVQLYKNDPQLDFGVALNARFK
Sequences:
>Translated_146_residues MLKRGVVVLGFFLFGHLSFSKPLKLDIKIPCKDVNFKTNYHTYTSISSPLPRDEKQSVGFSFFFNRLPSVSAIVDNIRSL NLSKTYQEPPPEIYTSDIRRHADYYEKDIITKNTYIRPTNKGNELVQLYKNDPQLDFGVALNARFK >Mature_146_residues MLKRGVVVLGFFLFGHLSFSKPLKLDIKIPCKDVNFKTNYHTYTSISSPLPRDEKQSVGFSFFFNRLPSVSAIVDNIRSL NLSKTYQEPPPEIYTSDIRRHADYYEKDIITKNTYIRPTNKGNELVQLYKNDPQLDFGVALNARFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16899; Mature: 16899
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRGVVVLGFFLFGHLSFSKPLKLDIKIPCKDVNFKTNYHTYTSISSPLPRDEKQSVGF CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCH SFFFNRLPSVSAIVDNIRSLNLSKTYQEPPPEIYTSDIRRHADYYEKDIITKNTYIRPTN HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC KGNELVQLYKNDPQLDFGVALNARFK CCCCEEEEECCCCCEEEEEEEEEECC >Mature Secondary Structure MLKRGVVVLGFFLFGHLSFSKPLKLDIKIPCKDVNFKTNYHTYTSISSPLPRDEKQSVGF CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCH SFFFNRLPSVSAIVDNIRSLNLSKTYQEPPPEIYTSDIRRHADYYEKDIITKNTYIRPTN HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC KGNELVQLYKNDPQLDFGVALNARFK CCCCEEEEECCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA