| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is 195952591
Identifier: 195952591
GI number: 195952591
Start: 191242
End: 191796
Strand: Direct
Name: 195952591
Synonym: HY04AAS1_0211
Alternate gene names: NA
Gene position: 191242-191796 (Clockwise)
Preceding gene: 195952590
Following gene: 195952592
Centisome position: 12.26
GC content: 38.02
Gene sequence:
>555_bases ATGTGGGACAAAACCAAGCTAAAAAGCGTTAAAAACCTCTACAAGGAGGAAGTGCTGCAGATACCGGCTATTTTTAAAAA CAAAGATGACTACGTGGCGTTTTTGATGGCGCAGTCTTATCAAGAATCTGGGTGGAATGAAGAAAGCGTTTCTAAAACAG GTTGTAAAGGCTTTGCTCAGTTTGAACTATCCACTTGGAAATTTGTTTGGAAAAAGCTCCTAAAACATGAAGAAATACCA AGCATATGGGACATAAAAGCTCAAATAATAGCCCAGCACACTTATATGAAATACCTTATAAACGCCGTTTCCAAGAAAGA ACCCATGTTACCAAGGCAGGAGATACTAGCCTATTCTTTGATGGCTTACAACGGTGGTCTTAGCGTGGTGGAGTGGTGTC TTGAATATCACGGTGTTGTTTCTGTAATAGCTTTAAGAGATTATAGAAATTCTCACAAAAGCACATACCCCGATGAAAAT AAAATTTTTGAAATTCTAAACTACCCAATATCCATCTTTAACATATGGCGTAGCCTTCGAGAAATTGCTGTATAA
Upstream 100 bases:
>100_bases AACCTAAGGCAGAAATCTGTGATAAAAGAAGACTATCACAGGGAGCTTGATAGGTTTTTCAAAGAAGTGTTTAGAAGACT TGACAGATTGGAGGCTTACT
Downstream 100 bases:
>100_bases TATGTGATAAATGAGGTTTTACATTAAAGAATGGGATGAAATCATACTTGTAAGTGTGTTGCTTTTATACATAATAGGTC TTGTAAATATAGCAAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MWDKTKLKSVKNLYKEEVLQIPAIFKNKDDYVAFLMAQSYQESGWNEESVSKTGCKGFAQFELSTWKFVWKKLLKHEEIP SIWDIKAQIIAQHTYMKYLINAVSKKEPMLPRQEILAYSLMAYNGGLSVVEWCLEYHGVVSVIALRDYRNSHKSTYPDEN KIFEILNYPISIFNIWRSLREIAV
Sequences:
>Translated_184_residues MWDKTKLKSVKNLYKEEVLQIPAIFKNKDDYVAFLMAQSYQESGWNEESVSKTGCKGFAQFELSTWKFVWKKLLKHEEIP SIWDIKAQIIAQHTYMKYLINAVSKKEPMLPRQEILAYSLMAYNGGLSVVEWCLEYHGVVSVIALRDYRNSHKSTYPDEN KIFEILNYPISIFNIWRSLREIAV >Mature_184_residues MWDKTKLKSVKNLYKEEVLQIPAIFKNKDDYVAFLMAQSYQESGWNEESVSKTGCKGFAQFELSTWKFVWKKLLKHEEIP SIWDIKAQIIAQHTYMKYLINAVSKKEPMLPRQEILAYSLMAYNGGLSVVEWCLEYHGVVSVIALRDYRNSHKSTYPDEN KIFEILNYPISIFNIWRSLREIAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21654; Mature: 21654
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDKTKLKSVKNLYKEEVLQIPAIFKNKDDYVAFLMAQSYQESGWNEESVSKTGCKGFAQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH FELSTWKFVWKKLLKHEEIPSIWDIKAQIIAQHTYMKYLINAVSKKEPMLPRQEILAYSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH MAYNGGLSVVEWCLEYHGVVSVIALRDYRNSHKSTYPDENKIFEILNYPISIFNIWRSLR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHH EIAV HHCC >Mature Secondary Structure MWDKTKLKSVKNLYKEEVLQIPAIFKNKDDYVAFLMAQSYQESGWNEESVSKTGCKGFAQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH FELSTWKFVWKKLLKHEEIPSIWDIKAQIIAQHTYMKYLINAVSKKEPMLPRQEILAYSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH MAYNGGLSVVEWCLEYHGVVSVIALRDYRNSHKSTYPDENKIFEILNYPISIFNIWRSLR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHH EIAV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA