Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

Click here to switch to the map view.

The map label for this gene is 195952572

Identifier: 195952572

GI number: 195952572

Start: 169212

End: 169772

Strand: Direct

Name: 195952572

Synonym: HY04AAS1_0192

Alternate gene names: NA

Gene position: 169212-169772 (Clockwise)

Preceding gene: 195952571

Following gene: 195952573

Centisome position: 10.85

GC content: 33.87

Gene sequence:

>561_bases
ATGGGGGTAAGTGATTTGAACGATATCATAAAGCAACTGCTAGAAGAAATTAAAAACTTAGAGACCAAAGTAGAGGATAT
AAAAGCTCCTATAGAGGAGACATCTAACTTACTTCCATCTGCTAGCGCTTCTTTGCAAGATGTGATTGAGTTTACCGAAA
AAAGTACACATCAAATCATGAGCCTTTTGGATGCCATAGAGACGAATTCTAAAAAGATAGATGAAGATATAAGTACCTTA
TTAAAATTAAAACCCACAAAAACCATAAACGGTATTTTGGAAGAGATAAAATCTTTAAACCAAGATAATCTCAATAAGCT
TATAGAAATATACACTGCAATGTCTTTTCAAGATATTACAGCTCAGCAGATAAAGAAAGTAATACAGGCTATAGAGGATA
CAAAGAGAAGGCTTCTTCAAATGGTGGTAAGCTCTATAGAAGCCAGCGAAAAGGATGAAACTACCAAAGAAAAAATTATA
GGTAAAGCAACGGAGATTTTAACTGGAGACCGCATAAACCAAGACGATGTAGATGAACTATTAAAAGAATTTGGACTTTA
G

Upstream 100 bases:

>100_bases
AAGGTTTAGGAGAAGGTATTAGAAACTTCAAAAAAGCACTTTCGGGGGAAGACGATAAATCAAGGGAAAAAGAGGTAAAA
GCAGAAGAGGTGAAGTAAAG

Downstream 100 bases:

>100_bases
AGGAGGTGCTTTTATGCCTTTACCACCAAGAGATATTAGAATACTGGTAGTAGACGATATGTCCACTATGAGAAGAGTTA
TCAAAAGCATACTAAACCAG

Product: chemotaxis phosphatase, CheZ

Products: NA

Alternate protein names: Chemotaxis Regulator CheZ

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTL
LKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKII
GKATEILTGDRINQDDVDELLKEFGL

Sequences:

>Translated_186_residues
MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTL
LKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKII
GKATEILTGDRINQDDVDELLKEFGL
>Mature_185_residues
GVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTLL
KLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIG
KATEILTGDRINQDDVDELLKEFGL

Specific function: Unknown

COG id: COG3143

COG function: function code NT; Chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20914; Mature: 20783

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SLLDAIETNSKKIDEDISTLLKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDIT
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIGKATEILTGDRINQDDVDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKEFGL
HHHHCC
>Mature Secondary Structure 
GVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SLLDAIETNSKKIDEDISTLLKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDIT
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIGKATEILTGDRINQDDVDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKEFGL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA