| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is 195952572
Identifier: 195952572
GI number: 195952572
Start: 169212
End: 169772
Strand: Direct
Name: 195952572
Synonym: HY04AAS1_0192
Alternate gene names: NA
Gene position: 169212-169772 (Clockwise)
Preceding gene: 195952571
Following gene: 195952573
Centisome position: 10.85
GC content: 33.87
Gene sequence:
>561_bases ATGGGGGTAAGTGATTTGAACGATATCATAAAGCAACTGCTAGAAGAAATTAAAAACTTAGAGACCAAAGTAGAGGATAT AAAAGCTCCTATAGAGGAGACATCTAACTTACTTCCATCTGCTAGCGCTTCTTTGCAAGATGTGATTGAGTTTACCGAAA AAAGTACACATCAAATCATGAGCCTTTTGGATGCCATAGAGACGAATTCTAAAAAGATAGATGAAGATATAAGTACCTTA TTAAAATTAAAACCCACAAAAACCATAAACGGTATTTTGGAAGAGATAAAATCTTTAAACCAAGATAATCTCAATAAGCT TATAGAAATATACACTGCAATGTCTTTTCAAGATATTACAGCTCAGCAGATAAAGAAAGTAATACAGGCTATAGAGGATA CAAAGAGAAGGCTTCTTCAAATGGTGGTAAGCTCTATAGAAGCCAGCGAAAAGGATGAAACTACCAAAGAAAAAATTATA GGTAAAGCAACGGAGATTTTAACTGGAGACCGCATAAACCAAGACGATGTAGATGAACTATTAAAAGAATTTGGACTTTA G
Upstream 100 bases:
>100_bases AAGGTTTAGGAGAAGGTATTAGAAACTTCAAAAAAGCACTTTCGGGGGAAGACGATAAATCAAGGGAAAAAGAGGTAAAA GCAGAAGAGGTGAAGTAAAG
Downstream 100 bases:
>100_bases AGGAGGTGCTTTTATGCCTTTACCACCAAGAGATATTAGAATACTGGTAGTAGACGATATGTCCACTATGAGAAGAGTTA TCAAAAGCATACTAAACCAG
Product: chemotaxis phosphatase, CheZ
Products: NA
Alternate protein names: Chemotaxis Regulator CheZ
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTL LKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKII GKATEILTGDRINQDDVDELLKEFGL
Sequences:
>Translated_186_residues MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTL LKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKII GKATEILTGDRINQDDVDELLKEFGL >Mature_185_residues GVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIMSLLDAIETNSKKIDEDISTLL KLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDITAQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIG KATEILTGDRINQDDVDELLKEFGL
Specific function: Unknown
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20914; Mature: 20783
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SLLDAIETNSKKIDEDISTLLKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDIT HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIGKATEILTGDRINQDDVDEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LKEFGL HHHHCC >Mature Secondary Structure GVSDLNDIIKQLLEEIKNLETKVEDIKAPIEETSNLLPSASASLQDVIEFTEKSTHQIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SLLDAIETNSKKIDEDISTLLKLKPTKTINGILEEIKSLNQDNLNKLIEIYTAMSFQDIT HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AQQIKKVIQAIEDTKRRLLQMVVSSIEASEKDETTKEKIIGKATEILTGDRINQDDVDEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LKEFGL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA