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The map label for this gene is secF [H]

Identifier: 195952503

GI number: 195952503

Start: 111058

End: 111939

Strand: Direct

Name: secF [H]

Synonym: HY04AAS1_0123

Alternate gene names: 195952503

Gene position: 111058-111939 (Clockwise)

Preceding gene: 195952495

Following gene: 195952504

Centisome position: 7.12

GC content: 35.37

Gene sequence:

>882_bases
ATGCGGATTAAATATATACATTTTATAAAGTATAGATACTATTCTTATGTGATATCTATAATATTGATATTGCTTTCAGC
TTTTAGCTTGTATACGAGAGGCTTAAACCTTGGCCTTGATTTTACCGGTGGGACAATGCTAGAAGTAAGGTTCCAAACAC
CTGTAAGCGTAAAGCAAGTAGATGATGCTCTTTATAAGGTAGATATCAAAGATGCAGTTGTTCAGCGTACAAACACTGGC
GATATTATTGTGAAGATAAGGGTAGGTGAGAAGCCAAGCCTTGTAGAAAAAGCGTTAAATAGCATTGGTAGTTTTCAGCT
TTTACAAAGAGAAGATATCGGTTCTGTGGTAAGTGGAGAACTAAGGAAAAAGGCTGTATGGGCTGTAATTACTGCTTTAG
TAGGCATACTGATATATCTATCCTTTAGATATGAGTTTTTGTTTGCTCTTGGTGGAATATTGGCGCTTGCTCACGACGTT
TTTATAGTTGTGGGTGCTTATTCTTGGACTTATAAAGAAGTGAGTTTGGACGTTTTGGCTTCAATTCTTGTGGTGGCTGG
CTATTCTATAACAGATACCGTGGTAGTATTTGATAGAATAAGAGAAAATCTCAAATTAAGAAAAGGTATGGACCTGTCTG
AGATTATAAACTTGTCTGTTAACCAAAATATAGTAAGGACCATAATGACATCTTCTACTGTGTTCTTATCTTCTTTAGGT
CTATACCTTTTTGGTGGAAGCGTTTTATCCGATATTTCTTTTGCGTTTTTAATAGGCGTTGTGGTGGGTACCCTTTCTTC
TATATTTGTGGCTTCAGCTCTTGTGCTTGATATAAAAATTTTACTTAGAAAGATCAAAAAACAAAAACCACAATCAATAT
AG

Upstream 100 bases:

>100_bases
TCAAAGCTTTCCACTTCAAGTTTTTCCTTTTCCATACTAAATATTATAAACTTTATACTTTTGGTTGGCAATATTAATTT
ATGATATACTAATACAAGTT

Downstream 100 bases:

>100_bases
TCATTGTCAAATTCTTCTAAGTTTATATTTTATTAAAATCTTAAAAGCAAAGGAGTGGTTGTTATGGGTAAAAAGTTGAA
CGCTCATGATAAGTTTATTT

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRIKYIHFIKYRYYSYVISIILILLSAFSLYTRGLNLGLDFTGGTMLEVRFQTPVSVKQVDDALYKVDIKDAVVQRTNTG
DIIVKIRVGEKPSLVEKALNSIGSFQLLQREDIGSVVSGELRKKAVWAVITALVGILIYLSFRYEFLFALGGILALAHDV
FIVVGAYSWTYKEVSLDVLASILVVAGYSITDTVVVFDRIRENLKLRKGMDLSEIINLSVNQNIVRTIMTSSTVFLSSLG
LYLFGGSVLSDISFAFLIGVVVGTLSSIFVASALVLDIKILLRKIKKQKPQSI

Sequences:

>Translated_293_residues
MRIKYIHFIKYRYYSYVISIILILLSAFSLYTRGLNLGLDFTGGTMLEVRFQTPVSVKQVDDALYKVDIKDAVVQRTNTG
DIIVKIRVGEKPSLVEKALNSIGSFQLLQREDIGSVVSGELRKKAVWAVITALVGILIYLSFRYEFLFALGGILALAHDV
FIVVGAYSWTYKEVSLDVLASILVVAGYSITDTVVVFDRIRENLKLRKGMDLSEIINLSVNQNIVRTIMTSSTVFLSSLG
LYLFGGSVLSDISFAFLIGVVVGTLSSIFVASALVLDIKILLRKIKKQKPQSI
>Mature_293_residues
MRIKYIHFIKYRYYSYVISIILILLSAFSLYTRGLNLGLDFTGGTMLEVRFQTPVSVKQVDDALYKVDIKDAVVQRTNTG
DIIVKIRVGEKPSLVEKALNSIGSFQLLQREDIGSVVSGELRKKAVWAVITALVGILIYLSFRYEFLFALGGILALAHDV
FIVVGAYSWTYKEVSLDVLASILVVAGYSITDTVVVFDRIRENLKLRKGMDLSEIINLSVNQNIVRTIMTSSTVFLSSLG
LYLFGGSVLSDISFAFLIGVVVGTLSSIFVASALVLDIKILLRKIKKQKPQSI

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=297, Percent_Identity=38.7205387205387, Blast_Score=190, Evalue=9e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32537; Mature: 32537

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKYIHFIKYRYYSYVISIILILLSAFSLYTRGLNLGLDFTGGTMLEVRFQTPVSVKQV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCHHHHH
DDALYKVDIKDAVVQRTNTGDIIVKIRVGEKPSLVEKALNSIGSFQLLQREDIGSVVSGE
HHHHHEEEHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHH
LRKKAVWAVITALVGILIYLSFRYEFLFALGGILALAHDVFIVVGAYSWTYKEVSLDVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
SILVVAGYSITDTVVVFDRIRENLKLRKGMDLSEIINLSVNQNIVRTIMTSSTVFLSSLG
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LYLFGGSVLSDISFAFLIGVVVGTLSSIFVASALVLDIKILLRKIKKQKPQSI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIKYIHFIKYRYYSYVISIILILLSAFSLYTRGLNLGLDFTGGTMLEVRFQTPVSVKQV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCHHHHH
DDALYKVDIKDAVVQRTNTGDIIVKIRVGEKPSLVEKALNSIGSFQLLQREDIGSVVSGE
HHHHHEEEHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHH
LRKKAVWAVITALVGILIYLSFRYEFLFALGGILALAHDVFIVVGAYSWTYKEVSLDVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
SILVVAGYSITDTVVVFDRIRENLKLRKGMDLSEIINLSVNQNIVRTIMTSSTVFLSSLG
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LYLFGGSVLSDISFAFLIGVVVGTLSSIFVASALVLDIKILLRKIKKQKPQSI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]