Click here to switch to the map view.

The map label for this gene is 195952488

Identifier: 195952488

GI number: 195952488

Start: 100611

End: 101108

Strand: Direct

Name: 195952488

Synonym: HY04AAS1_0108

Alternate gene names: NA

Gene position: 100611-101108 (Clockwise)

Preceding gene: 195952487

Following gene: 195952489

Centisome position: 6.45

GC content: 36.35

Gene sequence:

>498_bases
ATGAAAAGTGTCAAAAAATTAAGCAAAGCTTTTTCTATAGTTGAGCTTCTTGTGGTGATAGCCATACTTGCCATCTTGAC
ATATATATTTGTGGGACCTAGTATGAGGTGGTATCATCAATACAAACTCTATTCTGAAGGTCAGAGGCTACATTCTCTTG
TTATGGAAGCAAAAACCTATGCAATATCAAACTCGGTTTATGTTTCTTTGTGCAACAGCACTGGTTCTTCTTTAACTATT
TATAATTTGGGACTTTATCCAAACTCCTCTTGTGGCGGTAATATTGTAGAGTCTTATACTTTACCCTCTTACGAGGCTTC
TTATCTTAGCTATACAGGAAATCCGGGTTATATATCCTTTGATTCAAGGGGTGTGAGCGCTCAAAATGGAAATGTATGTG
TTTATGATTCTTATATAAACCAGTACTATATGATATGTGTTTCTTATGTCGGCATAAGAGATACATCTGGCACTGGCATA
TGCCCAACTAACTGCTAA

Upstream 100 bases:

>100_bases
GCGCACTGGCATGGGGGGCCAGGGGTCCCGGGTTCGAGTCCCGGCATTCCGATTTTAATTTTTTATTTTTTTTACGATAT
AATATTTATACGGTGATTTA

Downstream 100 bases:

>100_bases
ATATCATAGATTTTTAGTATTTTACTTGTTATAATTATCAATCTTAAATTAAAGAGAGGTTAGTGATTATGTATGCTGTT
ATAGAAACAGGGTCTAAACA

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKSVKKLSKAFSIVELLVVIAILAILTYIFVGPSMRWYHQYKLYSEGQRLHSLVMEAKTYAISNSVYVSLCNSTGSSLTI
YNLGLYPNSSCGGNIVESYTLPSYEASYLSYTGNPGYISFDSRGVSAQNGNVCVYDSYINQYYMICVSYVGIRDTSGTGI
CPTNC

Sequences:

>Translated_165_residues
MKSVKKLSKAFSIVELLVVIAILAILTYIFVGPSMRWYHQYKLYSEGQRLHSLVMEAKTYAISNSVYVSLCNSTGSSLTI
YNLGLYPNSSCGGNIVESYTLPSYEASYLSYTGNPGYISFDSRGVSAQNGNVCVYDSYINQYYMICVSYVGIRDTSGTGI
CPTNC
>Mature_165_residues
MKSVKKLSKAFSIVELLVVIAILAILTYIFVGPSMRWYHQYKLYSEGQRLHSLVMEAKTYAISNSVYVSLCNSTGSSLTI
YNLGLYPNSSCGGNIVESYTLPSYEASYLSYTGNPGYISFDSRGVSAQNGNVCVYDSYINQYYMICVSYVGIRDTSGTGI
CPTNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18207; Mature: 18207

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVKKLSKAFSIVELLVVIAILAILTYIFVGPSMRWYHQYKLYSEGQRLHSLVMEAKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AISNSVYVSLCNSTGSSLTIYNLGLYPNSSCGGNIVESYTLPSYEASYLSYTGNPGYISF
EECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEE
DSRGVSAQNGNVCVYDSYINQYYMICVSYVGIRDTSGTGICPTNC
CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSVKKLSKAFSIVELLVVIAILAILTYIFVGPSMRWYHQYKLYSEGQRLHSLVMEAKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AISNSVYVSLCNSTGSSLTIYNLGLYPNSSCGGNIVESYTLPSYEASYLSYTGNPGYISF
EECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEE
DSRGVSAQNGNVCVYDSYINQYYMICVSYVGIRDTSGTGICPTNC
CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA