| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is 195952464
Identifier: 195952464
GI number: 195952464
Start: 77396
End: 78196
Strand: Direct
Name: 195952464
Synonym: HY04AAS1_0084
Alternate gene names: NA
Gene position: 77396-78196 (Clockwise)
Preceding gene: 195952463
Following gene: 195952465
Centisome position: 4.96
GC content: 40.32
Gene sequence:
>801_bases ATGGATCAAAGTAGAAGAAATGTGTTAAAAGGAGCCATACTAGGCTTAGGAGCAGGAATGGTAGCTTCAGCCTTAAACCC AACGGCTGCCAAGGCTGAGGAAGTGGGCGCTTTGATACCAAAAGGTGCTAGGACACTAAAAGAGCTGGCAGAAAGGCTTG CAAAAGCACCAAGAAGAAGAAATTTCAAGTCTCTACCGATGGTTTTAACAGACAAAAATCAATGGGACTGGGAAGCTTTG GACGAAGTATTCAACTATAAAGGTGGTCCAAAACAAGTATGGGACAATTACGATATACACAGCGCTTGGCTAAACGTTAT GAGAAATGCTATGAATGCTCAAATATGGTCTTATAAAAATCCAGATTTCCTTTGTGTAAGCGCAACTCATGGTAATGCAC ACTTTGCTATATACGATGATTATGTATGGGAAACGTATATAACACCTTTGACAAAAGGAAAGTTAAAGAAAAATGTATGG CTTAAAATGAAACCTGGTATGCTTGAAAAAGATAGCCCTACAGATGAGTCTGGTGCTTTCTCACCAGCTGATAACAGCGT AGAAGCTCTTATAGAAAGAGGCGCTGTATTTTTGGCTTGCCACAATCAAACCTGGGAAATGGCAGGTGCACTTTTAAAAG CTGGAATAAATCCTCATAAACTTACCCACGACGAACTCTCTGCAGATCTTACAAACCATATCATACCACAAGCTATAGTA ACCCCAGGCGTGGTAGCTACAATACCAGAGCTTCAAATGAGAGGTTTCCATTATATAAACACGGCAGATTTTCCAAAATA A
Upstream 100 bases:
>100_bases TATATAACTATATCTTATTGACTTTTAAGAAAAAACTATAATATAATATTTACTATGAGGGTTAAACTATAAGATAACTT TCTAAAAAGGAGGAAACGTT
Downstream 100 bases:
>100_bases ATTTTAGGAGGTTAGAAGCATGAAAAAAGCTTTACTAGCTTTAAGTGTAATGGCGTTAGGCGCCGCAGCTTTTGCAACCA CAGATTTAAACCCTTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MDQSRRNVLKGAILGLGAGMVASALNPTAAKAEEVGALIPKGARTLKELAERLAKAPRRRNFKSLPMVLTDKNQWDWEAL DEVFNYKGGPKQVWDNYDIHSAWLNVMRNAMNAQIWSYKNPDFLCVSATHGNAHFAIYDDYVWETYITPLTKGKLKKNVW LKMKPGMLEKDSPTDESGAFSPADNSVEALIERGAVFLACHNQTWEMAGALLKAGINPHKLTHDELSADLTNHIIPQAIV TPGVVATIPELQMRGFHYINTADFPK
Sequences:
>Translated_266_residues MDQSRRNVLKGAILGLGAGMVASALNPTAAKAEEVGALIPKGARTLKELAERLAKAPRRRNFKSLPMVLTDKNQWDWEAL DEVFNYKGGPKQVWDNYDIHSAWLNVMRNAMNAQIWSYKNPDFLCVSATHGNAHFAIYDDYVWETYITPLTKGKLKKNVW LKMKPGMLEKDSPTDESGAFSPADNSVEALIERGAVFLACHNQTWEMAGALLKAGINPHKLTHDELSADLTNHIIPQAIV TPGVVATIPELQMRGFHYINTADFPK >Mature_266_residues MDQSRRNVLKGAILGLGAGMVASALNPTAAKAEEVGALIPKGARTLKELAERLAKAPRRRNFKSLPMVLTDKNQWDWEAL DEVFNYKGGPKQVWDNYDIHSAWLNVMRNAMNAQIWSYKNPDFLCVSATHGNAHFAIYDDYVWETYITPLTKGKLKKNVW LKMKPGMLEKDSPTDESGAFSPADNSVEALIERGAVFLACHNQTWEMAGALLKAGINPHKLTHDELSADLTNHIIPQAIV TPGVVATIPELQMRGFHYINTADFPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29598; Mature: 29598
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSRRNVLKGAILGLGAGMVASALNPTAAKAEEVGALIPKGARTLKELAERLAKAPRRR CCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHC NFKSLPMVLTDKNQWDWEALDEVFNYKGGPKQVWDNYDIHSAWLNVMRNAMNAQIWSYKN CCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEECCCC PDFLCVSATHGNAHFAIYDDYVWETYITPLTKGKLKKNVWLKMKPGMLEKDSPTDESGAF CCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SPADNSVEALIERGAVFLACHNQTWEMAGALLKAGINPHKLTHDELSADLTNHIIPQAIV CCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHH TPGVVATIPELQMRGFHYINTADFPK CCCHHHHCCHHHHCCEEEECCCCCCC >Mature Secondary Structure MDQSRRNVLKGAILGLGAGMVASALNPTAAKAEEVGALIPKGARTLKELAERLAKAPRRR CCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHC NFKSLPMVLTDKNQWDWEALDEVFNYKGGPKQVWDNYDIHSAWLNVMRNAMNAQIWSYKN CCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEECCCC PDFLCVSATHGNAHFAIYDDYVWETYITPLTKGKLKKNVWLKMKPGMLEKDSPTDESGAF CCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SPADNSVEALIERGAVFLACHNQTWEMAGALLKAGINPHKLTHDELSADLTNHIIPQAIV CCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHH TPGVVATIPELQMRGFHYINTADFPK CCCHHHHCCHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA