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The map label for this gene is smf [H]

Identifier: 195952460

GI number: 195952460

Start: 72829

End: 73830

Strand: Direct

Name: smf [H]

Synonym: HY04AAS1_0080

Alternate gene names: 195952460

Gene position: 72829-73830 (Clockwise)

Preceding gene: 195952459

Following gene: 195952461

Centisome position: 4.67

GC content: 33.93

Gene sequence:

>1002_bases
TTGCTAAAATCCATAAAAGGAATAGGCAACAAGTTACTATATAGGGCTTTTAGACATTTTGGTAGTGCCGAAGCAATATT
AAAAGCCGACAAAACATCTTTGGAGCCATTCTTCGGCTCCAAAGCTATAAATATTGTTGCTAAAGCTTTTGATAAAAACT
ATGTAAATAACGCTATTATTAAATTAAAACAGTTAAATATCGAAGCCATAACCTATGAAAATAAATTGTATCCTGCAAAT
ATGTTAAATCTTCTTGATCCTCCTCCGGTAATATTTTTAAAAGGTGATAAACCTTTGCTTTGTCAAAAATCTGTCAGCAT
AGTAGGCTCAAGGAAAGCCGTTTTGAGTGCTTTAAATATGACAAAATCTGTTGTATCAGAACTAAGACAAACTGTGGTAT
CTGGAGGAGCCGATGGTATAGACTCAAAAGCTCATCAAAGTGCTTTAGAAGAGTCTGTCCCCACTATAGCCGTTCTTGGT
TTTGGATTTTTGTATGCAAAACAAAGTCTTTTTGGAAAGATTCTAGATAAAGACGGTCTTTTGTTGACGGAATTTTTACC
TTTTGAGGCACCTTCAAAATATACGTTTCCAATGAGAAACAGAATAATAGCCGCTTTGGGAGATTATATTTTGGTTATGC
AAGCCTCTTCTAAAAGCGGTGCTCTTATAAGTGCGTATTGGGCTTTTAAATTAAACAAAAAAGTTTTTGCATATGTGGGA
AACCCGGTGGAAGAGTTTGAGGGTTGTGTAAACTTAGTAAGAGAAAATGTAGCTAAGCTTTTTACAAATAAATCCCATCT
TTTTAAAGACCTAGATTTATCTTTTGAAAAGCCAGAAAACCAACAAAATCCTATACTTTCTTTTCTTGATAAACCATGCA
CTTTTGATGAGCTTTTAGTAAAAACAAACTATGACGAGGAAAAACTTACAATGGAGCTTACCATGCTTGAAATAGAAGGC
TATATATCAAAAGACGGTGCTTATTTTGTGAAAAATGCATAG

Upstream 100 bases:

>100_bases
CTTTATCCCCTACTCACGTAGATAAAAAAGTCTTTGATAGAGGTATCATAGAAGATTCAAAGGGAAAAGATGTGCTTTGG
ATAATGTCGAAAGCTGGTTG

Downstream 100 bases:

>100_bases
GTTTTTTGCTTTTAGAAAAAATGGTACGATAGAGTTTTTTGAGGAAGATAAAAAGCATTTTAAAGTACTTAGAATAGAAA
AAAACGAACTTTTAGAGCTT

Product: SMF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIKLKQLNIEAITYENKLYPAN
MLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMTKSVVSELRQTVVSGGADGIDSKAHQSALEESVPTIAVLG
FGFLYAKQSLFGKILDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKKVFAYVG
NPVEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPILSFLDKPCTFDELLVKTNYDEEKLTMELTMLEIEG
YISKDGAYFVKNA

Sequences:

>Translated_333_residues
MLKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIKLKQLNIEAITYENKLYPAN
MLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMTKSVVSELRQTVVSGGADGIDSKAHQSALEESVPTIAVLG
FGFLYAKQSLFGKILDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKKVFAYVG
NPVEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPILSFLDKPCTFDELLVKTNYDEEKLTMELTMLEIEG
YISKDGAYFVKNA
>Mature_333_residues
MLKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAIIKLKQLNIEAITYENKLYPAN
MLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNMTKSVVSELRQTVVSGGADGIDSKAHQSALEESVPTIAVLG
FGFLYAKQSLFGKILDKDGLLLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKKVFAYVG
NPVEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPILSFLDKPCTFDELLVKTNYDEEKLTMELTMLEIEG
YISKDGAYFVKNA

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=311, Percent_Identity=28.2958199356913, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 37037; Mature: 37037

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAII
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
KLKQLNIEAITYENKLYPANMLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNM
EEEECCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH
TKSVVSELRQTVVSGGADGIDSKAHQSALEESVPTIAVLGFGFLYAKQSLFGKILDKDGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCE
LLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKKVFAYVG
EEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEC
NPVEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPILSFLDKPCTFDELLV
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
KTNYDEEKLTMELTMLEIEGYISKDGAYFVKNA
HCCCCHHHEEEEEEEEEEECEEECCCCEEEECC
>Mature Secondary Structure
MLKSIKGIGNKLLYRAFRHFGSAEAILKADKTSLEPFFGSKAINIVAKAFDKNYVNNAII
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE
KLKQLNIEAITYENKLYPANMLNLLDPPPVIFLKGDKPLLCQKSVSIVGSRKAVLSALNM
EEEECCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH
TKSVVSELRQTVVSGGADGIDSKAHQSALEESVPTIAVLGFGFLYAKQSLFGKILDKDGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCE
LLTEFLPFEAPSKYTFPMRNRIIAALGDYILVMQASSKSGALISAYWAFKLNKKVFAYVG
EEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEECCEEEEEEC
NPVEEFEGCVNLVRENVAKLFTNKSHLFKDLDLSFEKPENQQNPILSFLDKPCTFDELLV
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
KTNYDEEKLTMELTMLEIEGYISKDGAYFVKNA
HCCCCHHHEEEEEEEEEEECEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]