Click here to switch to the map view.

The map label for this gene is hspR [H]

Identifier: 195952404

GI number: 195952404

Start: 23147

End: 23542

Strand: Direct

Name: hspR [H]

Synonym: HY04AAS1_0024

Alternate gene names: 195952404

Gene position: 23147-23542 (Clockwise)

Preceding gene: 195952403

Following gene: 195952411

Centisome position: 1.48

GC content: 34.6

Gene sequence:

>396_bases
ATGAGCGCTGAAAGAAGAACCAAAGCGGTGTTTACTATAGGTACTGTAGCTAGAATGTATAAAATTCACCCTCAAACTCT
TAGGCTTTACGAAAGAGAAGGTCTTTTAAAACCTTCTAGAACCGAAGGCAATACAAGGCTTTATACAGAAGAAGACCTTG
AGCAGCTGGAGTTTATCCTTATGCTGGCAAGAGACCTGGGGGTAAACATAGCCGGTATAGATGTTATATTAAACATGAAA
AGGCAAATGGAAGAGATGCAAAAAGGTATTGAGCTTTTAATAGATATAATAAAAAAGATAAGAAGTGAGAATGTAAACTC
TGAAGACGTTGACAAAGCTATAGTGCTTATGAACAATTTAAACAAAGGTATTATAAAATTTACTAAAAAATCTTAG

Upstream 100 bases:

>100_bases
AATATGCTTTCAAAGATTATGGGTGATGGCAAAAAAGCTGAAAAACTATTGAAAGAACTTGATAAACTTTTACCAAAACC
TGAAAGGGTAGTGAAGAACT

Downstream 100 bases:

>100_bases
AGTGGTTTACCATTTATTAAATGCTTGACTACTTACTCCCGCAAACGTATCTTACACCTTTATCTGTTTTAGCCCAATGA
GGCGTGTTTGGTGCAAGTAT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSAERRTKAVFTIGTVARMYKIHPQTLRLYEREGLLKPSRTEGNTRLYTEEDLEQLEFILMLARDLGVNIAGIDVILNMK
RQMEEMQKGIELLIDIIKKIRSENVNSEDVDKAIVLMNNLNKGIIKFTKKS

Sequences:

>Translated_131_residues
MSAERRTKAVFTIGTVARMYKIHPQTLRLYEREGLLKPSRTEGNTRLYTEEDLEQLEFILMLARDLGVNIAGIDVILNMK
RQMEEMQKGIELLIDIIKKIRSENVNSEDVDKAIVLMNNLNKGIIKFTKKS
>Mature_130_residues
SAERRTKAVFTIGTVARMYKIHPQTLRLYEREGLLKPSRTEGNTRLYTEEDLEQLEFILMLARDLGVNIAGIDVILNMKR
QMEEMQKGIELLIDIIKKIRSENVNSEDVDKAIVLMNNLNKGIIKFTKKS

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15139; Mature: 15008

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAERRTKAVFTIGTVARMYKIHPQTLRLYEREGLLKPSRTEGNTRLYTEEDLEQLEFIL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH
MLARDLGVNIAGIDVILNMKRQMEEMQKGIELLIDIIKKIRSENVNSEDVDKAIVLMNNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
NKGIIKFTKKS
CCCCEEEECCC
>Mature Secondary Structure 
SAERRTKAVFTIGTVARMYKIHPQTLRLYEREGLLKPSRTEGNTRLYTEEDLEQLEFIL
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH
MLARDLGVNIAGIDVILNMKRQMEEMQKGIELLIDIIKKIRSENVNSEDVDKAIVLMNNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
NKGIIKFTKKS
CCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]