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The map label for this gene is ybdN [H]

Identifier: 194738346

GI number: 194738346

Start: 739967

End: 741202

Strand: Reverse

Name: ybdN [H]

Synonym: SeSA_A0763

Alternate gene names: 194738346

Gene position: 741202-739967 (Counterclockwise)

Preceding gene: 194737844

Following gene: 194737186

Centisome position: 15.74

GC content: 49.43

Gene sequence:

>1236_bases
ATGTCGGTTTATAAAGTTCCGCTTGAGCAAAATGTTCTGGAAGCGGCTCAAGAGCGTATAATGTGGACCCTGGAAACCTT
ACCCCGGGTCTGCGTCTCATTTTCCGGTGGTAAAGATTCAGGACTTATGCTGCACCTGACGGCAACGTTGGCGCGCAAAA
TGAATAAAAAGATCCACGTTCTCTTCATTGACTGGGAAGCGCAATTCTCCTGTACCATCGCCTATATTGAATCATTACGT
GAATACTACGCGGACGTTATCGAGCGTTTTTATTGGGTCGCATTACCCTTAACCACACAAAATTCCCTTTCACAATACCA
GCCGGAGTGGCAGTGTTGGCAGCCGGGTGCCGACTGGGTACGACAACCGCCAGAAGATGCGATTACCGATCCGGCCTTTT
TTTCCTTTTATCAACACGGCATGACCTTTGAACAGTTCGTTCGCGATTTTGCCGACTGGTTTTCAGAAAAGCGTCCTGCC
GCTATGCTGGTCGGTATTCGTTCCGACGAATCCTATAACCGATTTGCCGCTATCGCTAACTCGCATAAGCTGCGCTTTGC
CGACGACAAGCCCTGGACCACGTTAGCCCCTAAGGGTCACACCTGGTATATCTACCCCATCTATGACTGGAAAACCGCAG
ATATCTGGACCTGGTTCGCCAAAACAGGTAAACCATGTAACCCTTTGTATAATTTGATGTATCAGGCTGGCGTACCGCCC
CGTTACATGCGTATTTGCGAACCGTTCGGCCCGGAACAACGACAGGGGTTATGGCTGTATCATGTTATCGAACCTGAGCG
CTGGGCGGCCATGTGCGCCAGAGTCAGCGGCGTGCTCAGCGGAGGTATTTACGCTGGACAAGACAACCATTTTTATGGCC
ACCGGAAAATTTTAAAACCCGATCACCTTAACTGGGAAGAGTACGCGCTGCTCCTGCTACACAGTATGCCTGAAGTCACT
GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCATGAACACCATCCCACAGACGCA
GCAGGGCGATATCGGATCGCGCGATATTCCGTCGTGGCGACGGATCTGCAAAGTTTTACTGAACAATGATTACTGGTGCC
GGGCGCTGTCATTCAGTCCGACAAAACCTAAGAATTACCAGCGTTATAACGAACGTATGAAAGCTAAACGCCAGGAATGG
GGGATCTTATGCAACACCGACTCACAACCGAAATAA

Upstream 100 bases:

>100_bases
AGTAAATATAATAAAGCATTGCAAGTTCATCTAATCTGCTTATCCTTTATGTTAATTATTTCGAATATACTGTAGTTAAC
ACATCGGAGACTATCCAGAG

Downstream 100 bases:

>100_bases
CTCACTTTCTCTCTGAACTGCCTGAAGAAGAGAGAATCGCCGCCATTAATGAATTTAGAATGGCGATACATAACGTTAGT
CCTTTTCGCGATGAGCCTGT

Product: IbrA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
AMLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDNHFYGHRKILKPDHLNWEEYALLLLHSMPEVT
AEHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEW
GILCNTDSQPK

Sequences:

>Translated_411_residues
MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
AMLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDNHFYGHRKILKPDHLNWEEYALLLLHSMPEVT
AEHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEW
GILCNTDSQPK
>Mature_410_residues
SVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLRE
YYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPAA
MLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPPR
YMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDNHFYGHRKILKPDHLNWEEYALLLLHSMPEVTA
EHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEWG
ILCNTDSQPK

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=407, Percent_Identity=82.8009828009828, Blast_Score=724, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 48383; Mature: 48252

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHV
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHCCCEEEE
LFIDWEAQFSCTIAYIESLREYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCEEECCCHHHH
RQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPAAMLVGIRSDESYNRFAAIAN
CCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHC
SHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
CCEEEECCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHCCCCH
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDNHFYGHRKILKP
HHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCC
DHLNWEEYALLLLHSMPEVTAEHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWR
CCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHH
RICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEWGILCNTDSQPK
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure 
SVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHV
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHCCCEEEE
LFIDWEAQFSCTIAYIESLREYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGADWV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCEEECCCHHHH
RQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPAAMLVGIRSDESYNRFAAIAN
CCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHC
SHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
CCEEEECCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHCCCCH
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGVLSGGIYAGQDNHFYGHRKILKP
HHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCC
DHLNWEEYALLLLHSMPEVTAEHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWR
CCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHH
RICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEWGILCNTDSQPK
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]