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The map label for this gene is ysaA [H]

Identifier: 194738110

GI number: 194738110

Start: 3732213

End: 3732686

Strand: Reverse

Name: ysaA [H]

Synonym: SeSA_A3864

Alternate gene names: 194738110

Gene position: 3732686-3732213 (Counterclockwise)

Preceding gene: 194737487

Following gene: 194736698

Centisome position: 79.27

GC content: 61.18

Gene sequence:

>474_bases
ATGAACCGGTTTATTATGGCGGATGCGTCGGCGTGTATCGGGTGTCGTACCTGCGAGGTCGCCTGCGTGGTGTCGCACCA
GGAACAGCAGAATAGCGCGGCGGTGACGACGGCGGACTTTGTGCCGCGTATCCGGGTGATAAAAGAGGATAGCTTCACCA
CGGCCACGGTCTGCCATCAGTGTGAGGACGCGCCGTGCGCGAATGTCTGCCCGGTACAGGCGCTTCGACGTGATCGGGGG
CATATCTTCGTGACGCCATCGCGCTGCATTGGTTGTAAAAGCTGTATGCTGGCTTGCCCGTTTGGCGCGATGACCGTGGT
GGCGTCCACGTCAGGCGCGCAGGCGATTAAATGCGATCTTTGCTGGCATCGGGAAGCGGGGCCGGCGTGCGTGGAAGCCT
GCCCGACCAGTGCGTTACAGTGCGTTGACGCAGCACACGTGCAGCGCCAGCGCCTCTATTCTCAACCTTTCTGA

Upstream 100 bases:

>100_bases
TTATCAGGCATCTGACAAAATTTGTCCGTTTGCGTAGTGGGATCAAAGCGGCGGGGAATGGCTCTCTGGCATTCTGGCGT
TTTAACGCAGGGGGAGAACA

Downstream 100 bases:

>100_bases
ACGTCGTTCCGGCCTGCATGATGGCCGGAATAACCGTCAGCCTTCACGCCAGGCGCGTTCAATCTCTTCTGCCAGAATTT
TTACGCCCGCCTCGATTTTA

Product: protein AegA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIRVIKEDSFTTATVCHQCEDAPCANVCPVQALRRDRG
HIFVTPSRCIGCKSCMLACPFGAMTVVASTSGAQAIKCDLCWHREAGPACVEACPTSALQCVDAAHVQRQRLYSQPF

Sequences:

>Translated_157_residues
MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIRVIKEDSFTTATVCHQCEDAPCANVCPVQALRRDRG
HIFVTPSRCIGCKSCMLACPFGAMTVVASTSGAQAIKCDLCWHREAGPACVEACPTSALQCVDAAHVQRQRLYSQPF
>Mature_157_residues
MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIRVIKEDSFTTATVCHQCEDAPCANVCPVQALRRDRG
HIFVTPSRCIGCKSCMLACPFGAMTVVASTSGAQAIKCDLCWHREAGPACVEACPTSALQCVDAAHVQRQRLYSQPF

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI2367245, Length=156, Percent_Identity=71.7948717948718, Blast_Score=235, Evalue=1e-63,
Organism=Escherichia coli, GI1789067, Length=162, Percent_Identity=60.4938271604938, Blast_Score=188, Evalue=1e-49,
Organism=Escherichia coli, GI87082179, Length=154, Percent_Identity=48.0519480519481, Blast_Score=143, Evalue=6e-36,
Organism=Escherichia coli, GI1788811, Length=147, Percent_Identity=51.0204081632653, Blast_Score=143, Evalue=6e-36,
Organism=Escherichia coli, GI87082180, Length=156, Percent_Identity=41.6666666666667, Blast_Score=125, Evalue=1e-30,
Organism=Escherichia coli, GI1789079, Length=181, Percent_Identity=38.6740331491713, Blast_Score=120, Evalue=3e-29,
Organism=Escherichia coli, GI87082114, Length=190, Percent_Identity=35.2631578947368, Blast_Score=103, Evalue=4e-24,
Organism=Escherichia coli, GI1787122, Length=147, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=8e-16,
Organism=Escherichia coli, GI1787872, Length=150, Percent_Identity=34.6666666666667, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI2367345, Length=143, Percent_Identity=37.0629370629371, Blast_Score=73, Evalue=8e-15,
Organism=Escherichia coli, GI226510944, Length=144, Percent_Identity=35.4166666666667, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1787963, Length=154, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 16931; Mature: 16931

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
13.4 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIRVIKEDSFTTATVCHQ
CCEEEEECCCHHHCCCCEEEEEEECCCCCCCCCEEEEHHHCCEEEEEECCCCCHHHHHHH
CEDAPCANVCPVQALRRDRGHIFVTPSRCIGCKSCMLACPFGAMTVVASTSGAQAIKCDL
CCCCCCCCCCHHHHHHCCCCCEEEECHHHHCHHHHHHCCCCCCEEEEEECCCCCEEEEEE
CWHREAGPACVEACPTSALQCVDAAHVQRQRLYSQPF
EECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRFIMADASACIGCRTCEVACVVSHQEQQNSAAVTTADFVPRIRVIKEDSFTTATVCHQ
CCEEEEECCCHHHCCCCEEEEEEECCCCCCCCCEEEEHHHCCEEEEEECCCCCHHHHHHH
CEDAPCANVCPVQALRRDRGHIFVTPSRCIGCKSCMLACPFGAMTVVASTSGAQAIKCDL
CCCCCCCCCCHHHHHHCCCCCEEEECHHHHCHHHHHHCCCCCCEEEEEECCCCCEEEEEE
CWHREAGPACVEACPTSALQCVDAAHVQRQRLYSQPF
EECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]