Click here to switch to the map view.

The map label for this gene is nrdI [H]

Identifier: 194738058

GI number: 194738058

Start: 2859426

End: 2859836

Strand: Direct

Name: nrdI [H]

Synonym: SeSA_A2954

Alternate gene names: 194738058

Gene position: 2859426-2859836 (Clockwise)

Preceding gene: 194734445

Following gene: 194737455

Centisome position: 60.72

GC content: 56.2

Gene sequence:

>411_bases
ATGAGCGCGCTCGTCTACTTCTCCAGCAGCTCTGAAAATACGCACCGTTTTATGCAGCGTCTGGGGCTGCCTGCCACGCG
TATTCCGCTCAATGAACGGGAGCGAATTCAGGTAGACGAACCGTACATTCTGGTTGTGCCGTCATACGGCGGCGGCGGGA
TGGCCGGTGCGGTGCCGCGACAGGTGATCCGCTTTTTAAATGATGAACACAACCGGGCGCGCATTCGCGGCGTTATCGCC
TCCGGTAATCGCAATTTCGGCGATGCCTGGGGATGCGCTGGCGATGTGATAGCACAAAAATGCGGCGTTCCCTGGCTGTA
CCGCTTTGAGCTCATGGGCACACAACGCGACATCGATAACGTCCGAAAAGGAGTAAATGAATTTTGGCAACAACTATCCC
GGAGCGCGTAA

Upstream 100 bases:

>100_bases
TTCGTCAATTACCGGTGGTGATGGCGGGCGATTTGAGCTGGTCTGGCTTCCGCCCGGACATGATTAACCGTCTGCACCCG
ACACCCCACGCGGCAAACGC

Downstream 100 bases:

>100_bases
TGCAGGAAACCATGGATTACCACGCCCTGAACGCGATGCTGAATCTTTATGATAAAGCAGGCCATATTCAGTTCGACAAG
GACCAGCAGGCGATCGACGC

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA
SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLSRSA

Sequences:

>Translated_136_residues
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA
SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLSRSA
>Mature_135_residues
SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIAS
GNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLSRSA

Specific function: Probably involved in ribonucleotide reductase function [H]

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family [H]

Homologues:

Organism=Escherichia coli, GI1789029, Length=136, Percent_Identity=84.5588235294118, Blast_Score=241, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020852
- InterPro:   IPR004465 [H]

Pfam domain/function: PF07972 Flavodoxin_NdrI [H]

EC number: NA

Molecular weight: Translated: 15315; Mature: 15183

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR
CCEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH
QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
VRKGVNEFWQQLSRSA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR
CEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH
QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
VRKGVNEFWQQLSRSA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA