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The map label for this gene is ydiM [H]

Identifier: 194738034

GI number: 194738034

Start: 1406921

End: 1408162

Strand: Reverse

Name: ydiM [H]

Synonym: SeSA_A1457

Alternate gene names: 194738034

Gene position: 1408162-1406921 (Counterclockwise)

Preceding gene: 194737118

Following gene: 194736393

Centisome position: 29.9

GC content: 47.34

Gene sequence:

>1242_bases
ATGTCAGGCGGCATCTCTGAGTCAGATAATATGAAAAATCGTTATTTCCCTACCGCTGTAGGGTTATATTTTAATTACTT
TGTACATGGCATGGGGGTTATCCTGATGAGCCTGAACATGTCATCGCTTGAACAGCAATGGCATACCAGTGCCGCTGGCG
TATCTATTGTGATCTCTTCGCTTGGTATTGGCCGGTTAAGCGTTTTGTTAATCGCCGGTATGCTTTCCGATCGCTTTGGT
CGCCGTCCTTTTATCATTCTGGGGATCGCCTGTTACCTGATTTTTTTCATTGGCATTCTCTATGCTCAGACGATTTGTGT
CGCTTATGCCTGTGGCTTTTTAGCAGGTATGGCCAACAGTTTTTTGGATGCAGGTACCTATCCCAGTTTGATGGAAGCCT
TCCCTCGCTCCCCCAGTACGGCAAATATCCTGATCAAAGCATTTGTCTCTGGCGGACAATTCTTGTTGCCCATTATTATT
AGTTTATTAGTCTGGGCTAATATGTGGTTTGGCTGGTCCTTCCTGCTTGCCGGGGCGATCATGCTTATTAATGCTCTGTT
TTTATTACGCTGCCCTTTTCCACCCTATCCTGGTCGGATATTGAAGCCTAAAATCTCGCAAGCGCCTGTCGCAGGCGCAC
ATCATTGCTCCCTCATCGATCTTATCAGCTACACCCTTTATGGCTATATCTCGATGGCAACCTTTTATCTTATCAGCCAG
TGGCTGGCGCAGTATGGACAGTTCGTCGCAGGCATGTCGTATACCCAATCCATCAAACTGTTAAGTATTTATACCTGCGG
ATCGCTACTGTGCGTTTTTATTACCGCTCCGTTGGTCAGAAAAACAATTCGTTCTACCACATTATTGATGTTTTATACCT
TTATCTCTTTTATTGCGCTTCTGACGGTCTGCCTGCATCCTCAGGTCTATGTTGTTATGATCTTCGCATTCGTCATTGGA
TTCTCTTCCGCCGGTGGCGTAGTACAAATCGGCCTGACGCTGATGGCGGCCCGTTTTCCACGGGAGAAAGGTAAAGCGAC
CGGCATCTATTACAGCGCCGGCAGTATCGCGACGTTCACTATTCCGTTGATCACGGCGCGGATTTCAGAAATGAGCATTG
CACATATTATGTGGTTTGATACCGGTATCGCCGCAGCGGGATTTCTCCTCGCGCTATTCATCGGTTACCGAAGTCGGGCT
GAATCACAACACCACGCTGAAGCAGCGTCGACTGCGCAATAA

Upstream 100 bases:

>100_bases
TTATCGCCGCATCGTATTGATACCGGATAGAAAACCACACAATCACGACATTGACTTGTCACCCTATCCAATATGCTTCC
TGCCTGTGTATACCACTGTA

Downstream 100 bases:

>100_bases
AAGTTAGCGTGCCAGCTGCAATATTATTGCCTTGCTATGCAAAATAAAACGTTAGCTATTATCACCGGGAAACAAAAAAT
GTAATTTTCGTGTTAATTAT

Product: inner membrane transport protein YdiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSGGISESDNMKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFG
RRPFIILGIACYLIFFIGILYAQTICVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIII
SLLVWANMWFGWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVAGAHHCSLIDLISYTLYGYISMATFYLISQ
WLAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQVYVVMIFAFVIG
FSSAGGVVQIGLTLMAARFPREKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRA
ESQHHAEAASTAQ

Sequences:

>Translated_413_residues
MSGGISESDNMKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFG
RRPFIILGIACYLIFFIGILYAQTICVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIII
SLLVWANMWFGWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVAGAHHCSLIDLISYTLYGYISMATFYLISQ
WLAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQVYVVMIFAFVIG
FSSAGGVVQIGLTLMAARFPREKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRA
ESQHHAEAASTAQ
>Mature_412_residues
SGGISESDNMKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFGR
RPFIILGIACYLIFFIGILYAQTICVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIIS
LLVWANMWFGWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVAGAHHCSLIDLISYTLYGYISMATFYLISQW
LAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQVYVVMIFAFVIGF
SSAGGVVQIGLTLMAARFPREKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRAE
SQHHAEAASTAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=402, Percent_Identity=78.6069651741294, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI226510946, Length=394, Percent_Identity=35.7868020304569, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45085; Mature: 44954

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGISESDNMKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LGIGRLSVLLIAGMLSDRFGRRPFIILGIACYLIFFIGILYAQTICVAYACGFLAGMANS
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWFGWSFLLAGAI
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLINALFLLRCPFPPYPGRILKPKISQAPVAGAHHCSLIDLISYTLYGYISMATFYLISQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVCLHPQVYVVMIFAFVIGFSSAGGVVQIGLTLMAARFPREKGKATGIYYSAGSIATFT
HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHH
IPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRAESQHHAEAASTAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SGGISESDNMKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LGIGRLSVLLIAGMLSDRFGRRPFIILGIACYLIFFIGILYAQTICVAYACGFLAGMANS
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWFGWSFLLAGAI
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLINALFLLRCPFPPYPGRILKPKISQAPVAGAHHCSLIDLISYTLYGYISMATFYLISQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAQYGQFVAGMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVCLHPQVYVVMIFAFVIGFSSAGGVVQIGLTLMAARFPREKGKATGIYYSAGSIATFT
HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCEEEEECCCCHHHH
IPLITARISEMSIAHIMWFDTGIAAAGFLLALFIGYRSRAESQHHAEAASTAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]