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The map label for this gene is yafM [H]

Identifier: 194737946

GI number: 194737946

Start: 4682479

End: 4682970

Strand: Direct

Name: yafM [H]

Synonym: SeSA_A4825

Alternate gene names: 194737946

Gene position: 4682479-4682970 (Clockwise)

Preceding gene: 194737296

Following gene: 194736379

Centisome position: 99.44

GC content: 49.39

Gene sequence:

>492_bases
ATGTCGAACTATCGTCGTTATTACATTAACGGTGGCACCTGGTTTTTCACGGTTAATCTGAAAAACCGGAAAAGTGATTT
ACTTGTCCGCCAGATTGCGGAATTACGCTCTGCTATTCGCCGAGTGAAAAATACGAAGCCTTTTCAAATTGATGCTTTTG
TCGTGTTGCCTGAGCATCTGCATTGCATCTGGACGCTTCCTGAGAACGATTGTGACTTTTCATCTCGCTGGCGGGAGCTT
AAAAAGTTATTTACCAAATCGATAATGCGCCATGACGTGTGGCAGCCACGATTCTGGGAGCACGCGATTCGCGACGAAAA
GGATTTTCGCCGACATGCCGATTACCTCTACTTCAACCCCGTGAAGCACGGTTGGGTAAGGCGGGTGCAGGACTGGCCGT
TTTCGACCTTTCATCGTGATGTTCGCAATGGCGTTTACCCGGTTTATTGGGCGGGGGAGGTGAGGGATCTTGACGCTGGT
GAGTGGCGGTAA

Upstream 100 bases:

>100_bases
CTGCTGTTTATACTGCGGGCCTCATTCCCGAATTACCCTCTCCGCATTGCCTTTTGCTATTAACCCGTTACGTTTGGATT
TTGTTTAAGGAATGAACAAA

Downstream 100 bases:

>100_bases
TGCCGGATGGCGCGTTGCTTATCCGGCCTACAGAAAGCACTCATTTGTAGGCCGGATAAGGCGTAGCTGCCATCCGGCAA
TTCTTTAACGCACGGCCCCT

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKNTKPFQIDAFVVLPEHLHCIWTLPENDCDFSSRWREL
KKLFTKSIMRHDVWQPRFWEHAIRDEKDFRRHADYLYFNPVKHGWVRRVQDWPFSTFHRDVRNGVYPVYWAGEVRDLDAG
EWR

Sequences:

>Translated_163_residues
MSNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKNTKPFQIDAFVVLPEHLHCIWTLPENDCDFSSRWREL
KKLFTKSIMRHDVWQPRFWEHAIRDEKDFRRHADYLYFNPVKHGWVRRVQDWPFSTFHRDVRNGVYPVYWAGEVRDLDAG
EWR
>Mature_162_residues
SNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKNTKPFQIDAFVVLPEHLHCIWTLPENDCDFSSRWRELK
KLFTKSIMRHDVWQPRFWEHAIRDEKDFRRHADYLYFNPVKHGWVRRVQDWPFSTFHRDVRNGVYPVYWAGEVRDLDAGE
WR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=161, Percent_Identity=68.3229813664596, Blast_Score=240, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20062; Mature: 19931

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKNTKPFQIDAFVVLPEHL
CCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE
HCIWTLPENDCDFSSRWRELKKLFTKSIMRHDVWQPRFWEHAIRDEKDFRRHADYLYFNP
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCEEEECC
VKHGWVRRVQDWPFSTFHRDVRNGVYPVYWAGEVRDLDAGEWR
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCEEECCCCCCC
>Mature Secondary Structure 
SNYRRYYINGGTWFFTVNLKNRKSDLLVRQIAELRSAIRRVKNTKPFQIDAFVVLPEHL
CCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE
HCIWTLPENDCDFSSRWRELKKLFTKSIMRHDVWQPRFWEHAIRDEKDFRRHADYLYFNP
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCEEEECC
VKHGWVRRVQDWPFSTFHRDVRNGVYPVYWAGEVRDLDAGEWR
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]