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The map label for this gene is yniC [H]

Identifier: 194737902

GI number: 194737902

Start: 1368865

End: 1369533

Strand: Reverse

Name: yniC [H]

Synonym: SeSA_A1419

Alternate gene names: 194737902

Gene position: 1369533-1368865 (Counterclockwise)

Preceding gene: 194734882

Following gene: 194737419

Centisome position: 29.08

GC content: 54.86

Gene sequence:

>669_bases
ATGTCAACCCCACGTCAAATTCTTGCTGCAATTTTCGATATGGATGGACTACTGATCGATTCCGAACCGCTCTGGGATCG
CGCTGAACTGGACGTGATGGCAAGTTTAGGCGTAGATATTACTCGGCGCCATGAGTTACCAGACACGCTTGGGCTACGCA
TTGATATGGTTGTCGATCTCTGGTTTGCGCAGCAACCGTGGAGCGGCCCCGATCGCCAGGAAGTGACAAACCGTGTCATT
ACCCGCGCGATTACGCTTATCGAAGAGACGCGCCCTCTTTTACCGGGTGTGCGCGAGGCCGTGGCGCTGTGTAAAGCGCA
GGGGCTATTAGTGGGGCTTGCCTCGGCATCGCCGCTGCATATGCTGGAAAAAGTGCTCACCATGTTTGAGCTGCGCGACA
GTTTTGACGCGCTGGCCTCTGCGGAAAAATTGCCCTACAGCAAACCGCATCCGCAGGTCTATCTGGATTGTGCGGCCAAA
CTAGGCGTTGATCCATTAACCTGTGTGGCGCTGGAGGATTCAGTGAATGGTTTAATCGCGGCAAAGGCGGCGCGAATGCG
CGCCATTGTGGTGCCAGCAGAAGAAAACCAGCATGATCCGCGCTTTGTGCTGGCGAATGTCAAACTTAACTCACTGACAG
AGCTGACGGCGGCGCATCTACTCGGTTAA

Upstream 100 bases:

>100_bases
GATTCCCGTTTTCGCCTGATCTTTAAGGGCGATATACTAAGAACATGGTCATAATGAACGCTTAATTCGTTATTTTTTAA
TCTCAACAGGAGAGGTTGTG

Downstream 100 bases:

>100_bases
GATGTTTCCGAAACAAAGTCAACGGGCAATTAGCCGCTGAGCCAGACGGCAAGCGGCTTTGACAGAGACAAAGAGTTACA
ACGTCACCACTTCCGCCTAC

Product: 2-deoxyglucose-6-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRHELPDTLGLRIDMVVDLWFAQQPWSGPDRQEVTNRVI
TRAITLIEETRPLLPGVREAVALCKAQGLLVGLASASPLHMLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAK
LGVDPLTCVALEDSVNGLIAAKAARMRAIVVPAEENQHDPRFVLANVKLNSLTELTAAHLLG

Sequences:

>Translated_222_residues
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRHELPDTLGLRIDMVVDLWFAQQPWSGPDRQEVTNRVI
TRAITLIEETRPLLPGVREAVALCKAQGLLVGLASASPLHMLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAK
LGVDPLTCVALEDSVNGLIAAKAARMRAIVVPAEENQHDPRFVLANVKLNSLTELTAAHLLG
>Mature_221_residues
STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRHELPDTLGLRIDMVVDLWFAQQPWSGPDRQEVTNRVIT
RAITLIEETRPLLPGVREAVALCKAQGLLVGLASASPLHMLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAKL
GVDPLTCVALEDSVNGLIAAKAARMRAIVVPAEENQHDPRFVLANVKLNSLTELTAAHLLG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=222, Percent_Identity=89.6396396396396, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789046, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=8e-14,
Organism=Drosophila melanogaster, GI116008157, Length=223, Percent_Identity=26.9058295964126, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17137324, Length=225, Percent_Identity=27.5555555555556, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24365; Mature: 24233

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRHELPDTLGLRIDMVVDL
CCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHCCCHHHHEEE
WFAQQPWSGPDRQEVTNRVITRAITLIEETRPLLPGVREAVALCKAQGLLVGLASASPLH
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHH
MLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGLIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCHHHH
AKAARMRAIVVPAEENQHDPRFVLANVKLNSLTELTAAHLLG
HHHHHEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDITRRHELPDTLGLRIDMVVDL
CCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHCCCHHHHEEE
WFAQQPWSGPDRQEVTNRVITRAITLIEETRPLLPGVREAVALCKAQGLLVGLASASPLH
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHH
MLEKVLTMFELRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGLIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCHHHH
AKAARMRAIVVPAEENQHDPRFVLANVKLNSLTELTAAHLLG
HHHHHEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]