Definition Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome.
Accession NC_011094
Length 4,709,075

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The map label for this gene is lolD [C]

Identifier: 194737889

GI number: 194737889

Start: 3138128

End: 3138817

Strand: Direct

Name: lolD [C]

Synonym: SeSA_A3248

Alternate gene names: 194737889

Gene position: 3138128-3138817 (Clockwise)

Preceding gene: 194735498

Following gene: 194735593

Centisome position: 66.64

GC content: 58.55

Gene sequence:

>690_bases
ATGTTGACGTTAAATCAGGTCGCTTATCGCTGGCCGAATGCCGCAGCTGACTGTCTGCACGCTATCTCGCTTGAACTTCA
GGACGGCGAATGGCTGGCGTTGACCGGCGATAACGGCGCGGGAAAATCAACGCTGTTACGGATTATGTCCGGCCTGCTTT
CCCCCACTTCCGGCTCGGTAACGCTTAATGGAGAGCCGATTTCGCAGCTTAAAAATCGTCAACGCGCCGCCGCTATCGGC
GTACTCTTTCAGGAAGCGGAAAACCAGATTTTCCACAGCAATGTCGCGCAAGAGGTCGCTTTTGGGCTGAAACTACAACG
CTTATCGGCGGAGGAAATTTCACGGCGCACGCAGGCCGCGCTGCGGTTATGTCAGCTAACGGACGTCGCCGAGGCGCACC
CGCTCGATCTGCACGCCGCGCAGCGCCGGATGGTGGCGGTCGCCAGTCTGGAGGCGATGGCGCCGCCTGTGCTATTGCTG
GATGAACCCAGCCGGGATTTTGACGCCCACTGGCTAACCGTATTTGAACACTGGCTGGCGACATGCCGGGCACGGGGAAC
CAGCGTCGTGGCGATTAGCCATGACGCTGCGTTTACCCGGCGTCATTTTTCACGGGTGGTACGGCTGCATAATGGCGCGA
TAACGCCGCGTAACATCATTAAGGACACGCCATCCGATATTCGCCCGTAG

Upstream 100 bases:

>100_bases
AACGTCATTCTCTCATTGTGCTTTTTGAGCGTAATCATTTTCCTTTTCTGACGCGATGCCAGCGGGTATGGCAATTGCGT
GACGGAGCGCTAACCCCATT

Downstream 100 bases:

>100_bases
AGGTCATTTCCAGCATGAGATCGGCTGGCAGGCTACTTTCCAGCACCCGGCGCACATTTGGGCCGTCGGTGCGTTCATAA
AAGGTTTCCGCCTCCGCCTG

Product: putative ABC-type cobalt transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLTLNQVAYRWPNAAADCLHAISLELQDGEWLALTGDNGAGKSTLLRIMSGLLSPTSGSVTLNGEPISQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAMAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLHNGAITPRNIIKDTPSDIRP

Sequences:

>Translated_229_residues
MLTLNQVAYRWPNAAADCLHAISLELQDGEWLALTGDNGAGKSTLLRIMSGLLSPTSGSVTLNGEPISQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAMAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLHNGAITPRNIIKDTPSDIRP
>Mature_229_residues
MLTLNQVAYRWPNAAADCLHAISLELQDGEWLALTGDNGAGKSTLLRIMSGLLSPTSGSVTLNGEPISQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAMAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLHNGAITPRNIIKDTPSDIRP

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1118

COG function: function code P; ABC-type sulfate/molybdate transport systems, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4505771, Length=225, Percent_Identity=27.1111111111111, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI9961252, Length=225, Percent_Identity=27.1111111111111, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI42741659, Length=225, Percent_Identity=27.1111111111111, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI9961250, Length=232, Percent_Identity=26.2931034482759, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI9665248, Length=182, Percent_Identity=31.3186813186813, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI27477115, Length=152, Percent_Identity=26.9736842105263, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI255708477, Length=221, Percent_Identity=25.3393665158371, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI89111135, Length=225, Percent_Identity=27.1111111111111, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI171184400, Length=224, Percent_Identity=29.0178571428571, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI148612844, Length=221, Percent_Identity=25.3393665158371, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI27436953, Length=160, Percent_Identity=25, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI116734710, Length=163, Percent_Identity=29.4478527607362, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9955963, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI73747915, Length=223, Percent_Identity=27.3542600896861, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=30.8755760368664, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=32.2429906542056, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789873, Length=202, Percent_Identity=32.1782178217822, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=34.8039215686275, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=33.1632653061224, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789032, Length=213, Percent_Identity=30.0469483568075, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87082267, Length=213, Percent_Identity=27.6995305164319, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=31.4553990610329, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790739, Length=219, Percent_Identity=33.7899543378995, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.4678111587983, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790467, Length=194, Percent_Identity=29.3814432989691, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1790525, Length=217, Percent_Identity=28.110599078341, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=30.188679245283, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787712, Length=208, Percent_Identity=27.8846153846154, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=32.1608040201005, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=29.6650717703349, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=28.169014084507, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1786803, Length=212, Percent_Identity=29.7169811320755, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=29.3023255813954, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87081709, Length=150, Percent_Identity=30.6666666666667, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787105, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786345, Length=235, Percent_Identity=28.5106382978723, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=29.8507462686567, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=24.7706422018349, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786563, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788210, Length=201, Percent_Identity=30.3482587064677, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787547, Length=213, Percent_Identity=23.0046948356808, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787792, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788450, Length=205, Percent_Identity=28.2926829268293, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=31.0185185185185, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786872, Length=234, Percent_Identity=26.0683760683761, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788540, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=28.9719626168224, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788644, Length=213, Percent_Identity=26.2910798122066, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788897, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786319, Length=194, Percent_Identity=27.319587628866, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081782, Length=214, Percent_Identity=29.4392523364486, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787500, Length=209, Percent_Identity=24.4019138755981, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787112, Length=225, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI2367384, Length=181, Percent_Identity=30.3867403314917, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=25.609756097561, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI48994883, Length=233, Percent_Identity=23.6051502145923, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788053, Length=200, Percent_Identity=30.5, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786654, Length=198, Percent_Identity=29.2929292929293, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=225, Percent_Identity=24.4444444444444, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=221, Percent_Identity=26.6968325791855, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17569143, Length=223, Percent_Identity=27.3542600896861, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=229, Percent_Identity=23.5807860262009, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=221, Percent_Identity=24.4343891402715, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=221, Percent_Identity=24.4343891402715, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=214, Percent_Identity=23.3644859813084, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=224, Percent_Identity=26.7857142857143, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=228, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=197, Percent_Identity=23.8578680203046, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=230, Percent_Identity=25.2173913043478, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=187, Percent_Identity=26.2032085561497, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=197, Percent_Identity=21.8274111675127, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=233, Percent_Identity=21.0300429184549, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24666092, Length=148, Percent_Identity=31.0810810810811, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24659289, Length=215, Percent_Identity=27.906976744186, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85724864, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24580555, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85816269, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24580553, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550390, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573573, Length=148, Percent_Identity=29.0540540540541, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28573571, Length=148, Percent_Identity=29.0540540540541, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25181; Mature: 25181

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MLTLNQVAYRWPNAAADCLHAISLELQDGEWLALTGDNGAGKSTLLRIMSGLLSPTSGSV
CCCHHHHHHHCCCHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
TLNGEPISQLKNRQRAAAIGVLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAMAPPVLLLDEPSRDFDAHWLTVFEHWLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
TCRARGTSVVAISHDAAFTRRHFSRVVRLHNGAITPRNIIKDTPSDIRP
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTLNQVAYRWPNAAADCLHAISLELQDGEWLALTGDNGAGKSTLLRIMSGLLSPTSGSV
CCCHHHHHHHCCCHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
TLNGEPISQLKNRQRAAAIGVLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAMAPPVLLLDEPSRDFDAHWLTVFEHWLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
TCRARGTSVVAISHDAAFTRRHFSRVVRLHNGAITPRNIIKDTPSDIRP
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]