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The map label for this gene is pipD [H]

Identifier: 194737841

GI number: 194737841

Start: 1139309

End: 1140871

Strand: Reverse

Name: pipD [H]

Synonym: SeSA_A1158

Alternate gene names: 194737841

Gene position: 1140871-1139309 (Counterclockwise)

Preceding gene: 194738326

Following gene: 194734539

Centisome position: 24.23

GC content: 48.43

Gene sequence:

>1563_bases
ATGCCGGCAAAGAATATTGCTGGCTCGATCACTTTCTCGGTTTCCAATCCAGGGTCAATTCATCCCATAACGCGTTATTC
AGTGGGAACCTTTATGAAAAAGTATCTTGCATTCGCCGTTACGCTGCTGGGTATGGGTAAAGTCATCGCCTGTACTACCC
TTTTGGTAGGCAATCAGGCTTCGGCTGACGGCTCCTTTATTATCGCGCGCAACGAGGATGGCTCGGCAAATAACGCCAAG
CATAAGGTTATTCATCCCGTCGCGTTTCATCAACAAGGCGAGTATAAAGCACATCGGAACAATTTTAGCTGGCCGCTTCC
GGAGACAGCGATGCGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGG
CGGGCGTCGGAATGAGCGCAACGGAAACCATTTATAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACG
GGAATCACGGAAGACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGA
CATTATTGAACAAAAAGGCGCGGGCGAAGGTTTCGGCGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGG
GAAGCGGTCATCAATGGCTGGCAGTACGACTTCCGGCAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGGCAT
TACGATCCGAATGATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCC
GGCCCGCGGCGAATTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATACCACCTATAATTATCCGCGCGTCT
GGACGCTACAACACCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTCCTGTTTTTTTAACGCCA
ATAACGAAGATCAGCGTGGCGGCAGTAAAAAACGCGTTACGCAATCACTATCAGGGTACGTCGCACGACCCTTATGCCAA
TCATAATCCACAAGAACCATGGCGACCTATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAAT
TACCGCAGGCTATCGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTATCAGGGG
ATGCGTCATTATCAACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCT
GCAAACGCTGGTTATGCAGGACTACAATGCGTTTGCGCCAGATGTGCAACACGCCTGGAAAACATTTGAACAGCAAACAG
CTAAGCAGCAGTATAAGATGGAACAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCGCAACGCTTACTGCAA
AATTTTGAAGATAAAACGATGCAAAATGCGCAGACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTA
CCGCACAGATATGAAATATCACTTTTCAAGTACGCAACCATAA

Upstream 100 bases:

>100_bases
CCTGATAGCGGTGATAGCTAAGGTCAGTACAGGTTCTGTTCCCCTTCCCTGCCACAGGGCTGTGGTTATCAATACAACCT
CAATAAAGAGAAAATAAAGG

Downstream 100 bases:

>100_bases
ATTTAATGACAATCTATTAGCCACTCATACACAATAAGATAAAGCGGCACCAGAATTAGCCAGATATAAAAGACAATAAT
TATTATGGATTCATAGAGAG

Product: peptidase family C69

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MPAKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAK
HKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKT
GITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRH
YDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTP
ITKISVAAVKNALRNHYQGTSHDPYANHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQG
MRHYQPGDDKGTDRASNDSTYWTFRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQ
NFEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP

Sequences:

>Translated_520_residues
MPAKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAK
HKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKT
GITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRH
YDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTP
ITKISVAAVKNALRNHYQGTSHDPYANHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQG
MRHYQPGDDKGTDRASNDSTYWTFRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQ
NFEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP
>Mature_519_residues
PAKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKH
KVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTG
ITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRHY
DPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPI
TKISVAAVKNALRNHYQGTSHDPYANHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGM
RHYQPGDDKGTDRASNDSTYWTFRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQN
FEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 58394; Mature: 58263

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQA
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
SADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFD
CCCCCEEEEECCCCCCCCCCCEEECCHHCCCCCCCHHHCCCCCCCCCHHHHHEEEEECCC
TNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQ
CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHH
GAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRH
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEE
YDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQF
CCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCC
NPHLDTVVSEGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYANHNPQEPWRPISVF
CCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEE
RTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDST
ECCCCCEEEECCHHHHHHCCCEEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCE
YWTFRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQ
EEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NFEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCC
>Mature Secondary Structure 
PAKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQA
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
SADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFD
CCCCCEEEEECCCCCCCCCCCEEECCHHCCCCCCCHHHCCCCCCCCCHHHHHEEEEECCC
TNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQ
CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHH
GAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRH
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEE
YDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQF
CCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCC
NPHLDTVVSEGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYANHNPQEPWRPISVF
CCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEE
RTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDST
ECCCCCEEEECCHHHHHHCCCEEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCE
YWTFRTLQTLVMQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQ
EEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NFEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9723926 [H]