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The map label for this gene is potH [H]

Identifier: 194737836

GI number: 194737836

Start: 1003857

End: 1004810

Strand: Direct

Name: potH [H]

Synonym: SeSA_A1032

Alternate gene names: 194737836

Gene position: 1003857-1004810 (Clockwise)

Preceding gene: 194738320

Following gene: 194735805

Centisome position: 21.32

GC content: 52.73

Gene sequence:

>954_bases
ATGAGCACACTTGAACCTCCGGCACGCATCAGTAAACCTGGCGGCGCGGCGCTATGGTTGGCGCGGATGCAAATGAAACA
TGGGCGTAAGCTGGTTATTGCTTTGCCTTATATCTGGCTCATTCTGCTGTTTTTACTGCCGTTTCTTATCGTCTTTAAGA
TAAGCCTGGCGGAAATGGCGAGGGCGATCCCGCCGTATACCGATCTGCTGGAATGGGCTGACGGTCAGTTGTCGATTACG
CTCAATCTCGGCAATTTTTTGCAACTGACCGACGATCCGCTTTATTTCGAAGCCTATCTGCAATCGTTACAAATTGCCGG
TATTTCCACCATCTGCTGCCTGCTGTTGGGCTACCCGCTGGCGTGGGCGGTGGCGCACAGCAAGCCCTCCACGCGCAATA
TCCTGCTGCTGTTGGTGATCCTGCCCTCGTGGACGTCTTTTTTAATACGCGTCTATGCCTGGATGGGCATTTTGAAAAAC
AACGGCGTGCTGAACAATGTGTTGCTGTGGCTAGGGGTTATCGATCAGCCGCTGACGATCCTGCACACTAACCTGGCCGT
CTATATCGGCATTGTTTATGCTTATCTGCCGTTTATGGTTCTGCCCATTTATACCGCATTGACGCGCATTGATTATTCGC
TGGTGGAAGCGTCGCTGGATCTCGGCGCCCGACCGCTGAAAACGTTTTTTAGCATCATTGTACCGCTCACCAAAGGCGGA
ATCATCGCCGGCTCGATGCTGGTTTTTATCCCGGCGGTGGGCGAGTTCGTGATCCCGGAACTGCTTGGCGGGCCGGACAG
TATCATGATTGGTCGCGTTCTGTGGCAGGAGTTTTTCAATAACCGCGACTGGCCGGTGGCTTCTGCGGTCGCCATTATTA
TGTTGCTGCTGCTGATAGTACCGATCATGTGGTTCCATAAACATCAGCAAAAAAGTGTGGGGGAGCACGGATGA

Upstream 100 bases:

>100_bases
TGCGCACCGTTACCGGAAAGGGTTACCGACCTGGGGCGATGAAGTGCGTTTGTGCTGGGAAGCGGATAGCTGCGTGGTCC
TGACGGTATAAGGGGGAAAC

Downstream 100 bases:

>100_bases
ATAACTTACCGGTCGTTCGCTCGCCCTGGCGCATTCTGATTCTGGTGCTGGGGTTTACTTTTCTCTATGCGCCGATGTTA
ATGTTGGTGATTTACTCGTT

Product: putrescine transporter subunit: membrane component of ABC superfamily protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSTLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTDLLEWADGQLSIT
LNLGNFLQLTDDPLYFEAYLQSLQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
NGVLNNVLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSIIVPLTKGG
IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG

Sequences:

>Translated_317_residues
MSTLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTDLLEWADGQLSIT
LNLGNFLQLTDDPLYFEAYLQSLQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
NGVLNNVLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSIIVPLTKGG
IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG
>Mature_316_residues
STLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTDLLEWADGQLSITL
NLGNFLQLTDDPLYFEAYLQSLQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNN
GVLNNVLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSIIVPLTKGGI
IAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=317, Percent_Identity=92.7444794952681, Blast_Score=563, Evalue=1e-162,
Organism=Escherichia coli, GI1787369, Length=254, Percent_Identity=44.4881889763779, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1787713, Length=241, Percent_Identity=32.3651452282158, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35375; Mature: 35244

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMA
CCCCCCCHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIPPYTDLLEWADGQLSITLNLGNFLQLTDDPLYFEAYLQSLQIAGISTICCLLLGYPL
HHCCCHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNVLLWLGVIDQPLTI
HHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSIIVPLTKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PIMWFHKHQQKSVGEHG
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STLEPPARISKPGGAALWLARMQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMA
CCCCCCHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIPPYTDLLEWADGQLSITLNLGNFLQLTDDPLYFEAYLQSLQIAGISTICCLLLGYPL
HHCCCHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNVLLWLGVIDQPLTI
HHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
LHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSIIVPLTKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PIMWFHKHQQKSVGEHG
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]